| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1945 |
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| Symbol | |
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| ID | 8419790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2228441 |
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| End bp | 2229136 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038533 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_003198807 |
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| Protein GI | 258406065 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.77987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTCAC CCCCTCTCCA GCATCTGGCC ATCATCATGG ACGGCAACGG CCGTTGGGCC
CGCCAGCGCG GTCTGCCACG CAGTGAAGGA CACAAGGCGG GCACCCAGAG CGCCAAGGCG
ATCGTGACCG CTTGCCGCAA ACGGGCGATC CCCTATGTCA CGCTCTACAC CTTCTCGCGG
GAGAACTGGG CCCGCCCCAA GGAGGAGATC AATTTCCTGT TCGATCTCCT GGTCCGCTTT
TTACGGCGCG AGGTCCAGGA CCTCAAAGAA CAAGGAATAC GGCTCAACAT CCTTGGAGAT
CTCAAGGGTT TGCCGGCCGC CCCTCGGCGG GCAGTCGAAC ACGTCTGCCG CCAAACCGCC
GACGGTCGTG CGATGACGCT CAACCTGGCT CTGAATTATT CCGGCCGGGA GGAGATTCTC
CGCGTCTGCC GCGAATTGCT CCAGCAGCAG GTGGCGCCGG AGGAGGTCAC TGTCGAGCAG
TTCGCGCAGC GGCTGTACAC CGGAGGACAG CCCGATCCCG ACCTCCTGAT CCGCACCAGC
GGAGAAAAAC GGCTCAGCAA CTACCTCCTG TTCCAGTGCG CCTACACCGA ATTTTCTTTT
CCCGAGGTTC TCTGGCCGGA TTTCGACGAG CACGAGCTCG ATGCGGCCTT GCATGAATAC
CAGCAGCGGC AGCGCCGCTT CGGAAGCATA CGGTAG
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| Protein sequence | MTSPPLQHLA IIMDGNGRWA RQRGLPRSEG HKAGTQSAKA IVTACRKRAI PYVTLYTFSR
ENWARPKEEI NFLFDLLVRF LRREVQDLKE QGIRLNILGD LKGLPAAPRR AVEHVCRQTA
DGRAMTLNLA LNYSGREEIL RVCRELLQQQ VAPEEVTVEQ FAQRLYTGGQ PDPDLLIRTS
GEKRLSNYLL FQCAYTEFSF PEVLWPDFDE HELDAALHEY QQRQRRFGSI R
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