| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1939 |
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| Symbol | |
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| ID | 8419784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2222434 |
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| End bp | 2224101 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038527 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_003198801 |
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| Protein GI | 258406059 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA AAAACGACAC GCCCTGGGTA ACCCTCTCGC CTCTGGGCGG GCTGGGCCAG
ATAGGGCTCA ATTGCATGCT TTTGGAAACC GCTGACTCGG CGGTGCTGAT CGACTGCGGG
CTGATGTTTC CCGATGAGGT CCATCTTGGT GTGGACGTGG TCATTCCCCG CTTCGATTTC
CTGCTGGAAA AAAAACACAA GCTCAAAGCG GTGGTCCTGA CCCACGGACA CGAGGACCAT
ATCGGTGCCT TACCCTGGCT GCTCAAGGAG ATGCCAGAAG TCCCGCTTTA CAGTTCCCCG
TTCACCCTGG CCCTGGTCCG CAACAAACTC CGGGAGCACG ACCTCGCCGA CACGGTCACC
TTGTGCCCCA TGGAGCCGCG CCAGAGCGCT GAACTCGGAG ATTTCCGCTT CCATTTCTTT
CCCGTCTGCC ACTCGATCAT CAAGGGGTAC GGCCTGGGAA TTGAAACCCC GGTCGGCCGT
TTTGTGCACA CCGGGGACTT CAAGATCGAC CGCAATCCCC TTGGCGAACA CGCCACCGAT
CTGGAAGCCT TCGGCGATTT CGCCGCCGGC GGGGTGACCC TGCTCATGTC GGATTCGACC
AATGTCGAAC GCGATGGCTA CGCCCTGACC GAGCGTGAGA TCCGCGACTC CCTCGATGAC
ATCTTCACCC AGGCTGACGG CCGCATCCTG GTGACCCTGT TTTCCAGCCA CGTGCAGCGG
ATCCAGGAGA TATTCGAACT CGCCCACCGC TACGGCCGCA AAGTCGCGGT CAGCGGCCGG
AGCTTGAACG TCAATATCGA AACCGCCCGC GAACTGGGCT ATCTCGAATT CGCTGACGAG
GACTTCGTCA GCCTCGAAGA CCTGGCCCAC CTTCCCGACG ACAAGGTCGT CCTCCTGGTC
ACCGGGTCCC AGGGCGAACC CATGTCCGCG CTGACTCGTC TGGCCGAGGG CGACCACCGG
CAACTGCGCG TGCACAAGGG CGATCTGGTG GTCATGTCCT CGCGCTTCAT TCCGGGCAAC
ACCAAGGCCA TCACCAAGGT CATCAACAAG CTTTACAAAC TCGGCGCCGA GGTCCTGAAC
GAAAAGGTCC AGGCCATTCA CGCCTCAGGG CACGCCCACA AGGAAGAATT GCGGACCATG
CTGGAAACAG TGCATCCCAA ATTCTTCATC CCGGTCCACG GCGAATACCG ACATCTGCAC
AAGCATATCG AACTCGCCCG GGAATGCGGC GTGGCCCCGG AACGGTGTTT TCTGCTCGAA
AACGGCCAAC CCGTGACCCT GTTCAAGGGA GAAGTCCGGC TCGAGGATCC CATCGGGGTC
GAATCGGTGC TGGTCGACGG CAAGGGGGTT GGCGATGTCG GCCGGACCAT TCTCAAAGAG
CGCCGGCTCT TGGGCGATGA GGGGATGGTC GTGGCCTTGT TGGTCATCGA AGAGGCCACA
GGGGAGATCA TTCTCGGTCC CCAGGTCCAG TCCAAAGGGT TCGTCTTCGA GCGCCACTTC
TCCCATGTCC TGGACGACGC CAAAGAGGTC ATGCTCGACG TCTATGCGAA CATGCCCAAA
GGGGCGTCCC AGAAAATGGA GAACCGGATC AAATCGGCTC TTCGCCGCCA TTTCCGCAAG
GTTCTGGACC GCGACCCGGT CATCGTTCCC CTGGTGATCA CGGTCTAG
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| Protein sequence | MAEKNDTPWV TLSPLGGLGQ IGLNCMLLET ADSAVLIDCG LMFPDEVHLG VDVVIPRFDF
LLEKKHKLKA VVLTHGHEDH IGALPWLLKE MPEVPLYSSP FTLALVRNKL REHDLADTVT
LCPMEPRQSA ELGDFRFHFF PVCHSIIKGY GLGIETPVGR FVHTGDFKID RNPLGEHATD
LEAFGDFAAG GVTLLMSDST NVERDGYALT EREIRDSLDD IFTQADGRIL VTLFSSHVQR
IQEIFELAHR YGRKVAVSGR SLNVNIETAR ELGYLEFADE DFVSLEDLAH LPDDKVVLLV
TGSQGEPMSA LTRLAEGDHR QLRVHKGDLV VMSSRFIPGN TKAITKVINK LYKLGAEVLN
EKVQAIHASG HAHKEELRTM LETVHPKFFI PVHGEYRHLH KHIELARECG VAPERCFLLE
NGQPVTLFKG EVRLEDPIGV ESVLVDGKGV GDVGRTILKE RRLLGDEGMV VALLVIEEAT
GEIILGPQVQ SKGFVFERHF SHVLDDAKEV MLDVYANMPK GASQKMENRI KSALRRHFRK
VLDRDPVIVP LVITV
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