| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1865 |
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| Symbol | |
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| ID | 8419708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2136104 |
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| End bp | 2137324 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038451 |
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| Product | diaminopimelate aminotransferase |
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| Protein accession | YP_003198727 |
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| Protein GI | 258405985 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.363137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0244826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGACC GTCTTTTTGC CTATCTGGAC ACCCAACGCG ATGCTATTGT CGATCTGCAG
CGGGAATTAG TCGCCCGTCC TGCCCTGGGC CCGGAAAACG GTGGCCAGGG CGAGGTTGAA
AAAGCTGAAT TTTTGACCGC TTACCTCAAA GACATGGGGC TGAGCGACAT CCGGGTCCTG
CACGCCCCGG ACAACAGGGT TCCCTCCGGC TCCCGGCCGT CCATCGCCGC CGTCCTGCCC
GGCAAGGATA CCTCGCGAAC CATCTGGTTC GTGGCCCACA CCGATGTGGT GCCCGCTGGT
GACGATTCCC TCTGGGACAG CGACCCCTTC CAACTCCGCC AGGAAGGCGA TCTCCTCTAC
GGCCGCGGCG TGGAAGACAA CCACCACGGC CTGGTCGCCG CTCTCCTGAC CGCCAAGGCG
TTTGTGCAGG AAGAGGCCCA GCCCGACGTC AATTGCGGCC TGTTGCTGGT GGCTGATGAA
GAGACCGGCA ACACCTATGG CCTCGATTAT ATCCTCCGCG AGCACGGCAA TCTGTTCGCT
CCGGGCGACC AGTTTCTGGT CCCGGATTTC GGCGTTGAAG ACGGGTCCAC CGTGGAAGTG
GCTGAAAAAG GTATGCTCTG GGTCAAGTGC ACGGTCCACG GCCGCCAATG CCACGCCTCC
TCCCCCGACC AGGGCGTGAA CTCCTTTGTC GGCGCTTCGG CCCTGGCCCT GCGTCTGCGC
GGGCTCTATG AGCATTTTGA CGCCCAGGAC CCCTTATTCG CTCCGCCCTA CTCGACCTTC
GAGCCCACGA AAAAGGAAGC CAACGTCCCC AATGTGAACA CCATTCCCGG CCGGGACGTC
TTCTATCTCG ATTGCCGGGT GCTGCCCCGC TACGATCTGG ACGATGTCCT GACCAAGGCC
CGCCAGGAGG CCGATGTTGT CGAACAGGAT TACGGGGTGC GCGTCGAACT GGAGACCGTC
CACCGTGAAT CAGCGCCGGG CACGGACCCG CAGACCCCCA TTGTCCAAAG CGTGCTCACC
GCGCTGCGTG ACGTGCGCGG GATCACCGGT CAGGCCAAGG GAGTCGGCGG CGGCACCGTG
GCTGCCTATC TGCGCCGGGA CAATCGGCCC GCCGTGGTCT GGAGCACGCT GCTGCACAAC
GCCCACCAGC CCAACGAGCA CACGAAAATC AGCAACATCA TAGCCGACGC CAAAGTCATG
ACCGCCTTGC TGGTCGAGTA A
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| Protein sequence | MRDRLFAYLD TQRDAIVDLQ RELVARPALG PENGGQGEVE KAEFLTAYLK DMGLSDIRVL
HAPDNRVPSG SRPSIAAVLP GKDTSRTIWF VAHTDVVPAG DDSLWDSDPF QLRQEGDLLY
GRGVEDNHHG LVAALLTAKA FVQEEAQPDV NCGLLLVADE ETGNTYGLDY ILREHGNLFA
PGDQFLVPDF GVEDGSTVEV AEKGMLWVKC TVHGRQCHAS SPDQGVNSFV GASALALRLR
GLYEHFDAQD PLFAPPYSTF EPTKKEANVP NVNTIPGRDV FYLDCRVLPR YDLDDVLTKA
RQEADVVEQD YGVRVELETV HRESAPGTDP QTPIVQSVLT ALRDVRGITG QAKGVGGGTV
AAYLRRDNRP AVVWSTLLHN AHQPNEHTKI SNIIADAKVM TALLVE
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