Gene Dret_1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1844 
Symbol 
ID8419685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2116165 
End bp2116842 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID645038428 
ProductMethyltransferase type 11 
Protein accessionYP_003198706 
Protein GI258405964 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00648646 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTTG GAGAAGAGCG AGAAATTGTG TTCACATCAC CGGCACCGGA GACTGTGGCG 
GCGCTGTGTC GCTACGCGGA TGTTGCAGGT AGTCGGGTAT TGGAGATCGG CTCCGGAAGC
GGGCGACTGT CCGGGGAACT GCACCAAGTG GCTGAACGAC TGGTGGCCCT CGAACCGGGA
GTGGCGGATT TGCGGCAGGC GCTCCGGGGA ATCCCGGGGC TGGAGGGAGT TTGCGGTAGC
GGTGAGGCCC TGCCGTTTGT CCCGGAAACG TTTGATCTGG CGATTTTTTC TCTGTCCTTG
CACCACCATC CGGACTGCAC GGCAGCTTTG ACTCAGGCTG CGGAAGTCGT TCGGCCCGGG
GGGCGTATTC TCGCCCTTGA ACCGCGTCAT GAGGGCGAAC TCTCCCAGGT CTGCACTGTC
TTCCATGACG AGCGTGAGGC CTTGGAACGG GCGCGACTGG CGTTGGCGGC GTGGCCAGAG
GGGCGGTGCT TTTCCCTGCC GACAGAATGG TCCTTCGCTG GCCCTGAAGC GTTGGCGCAA
TGGGTTTTTG AGTATTACGA ACAGCCTTAC GAGACCGCGC TTGTGGATTG GATGCTGGCG
CGGCTCGGGC CGCGCCAGAC ACTGCGGCCG CTGCTGGTGG ACGATCCCTT GTGGTGCTGG
GTGCTGCAGC GGAGGTAA
 
Protein sequence
MTVGEEREIV FTSPAPETVA ALCRYADVAG SRVLEIGSGS GRLSGELHQV AERLVALEPG 
VADLRQALRG IPGLEGVCGS GEALPFVPET FDLAIFSLSL HHHPDCTAAL TQAAEVVRPG
GRILALEPRH EGELSQVCTV FHDEREALER ARLALAAWPE GRCFSLPTEW SFAGPEALAQ
WVFEYYEQPY ETALVDWMLA RLGPRQTLRP LLVDDPLWCW VLQRR