| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1843 |
|---|
| Symbol | |
|---|
| ID | 8419684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 2115198 |
|---|
| End bp | 2115650 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645038427 |
|---|
| Product | 17 kDa surface antigen |
|---|
| Protein accession | YP_003198705 |
|---|
| Protein GI | 258405963 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4520] Surface antigen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000317779 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAG ACATCATTGC CATCCTGCTT GCGATCTGCC TCTTCGGTCT GTCCGCCTGC
GCCTCGAACA CCAGCAAAGC CCAGCAAGGC GCAACACTTG GGGCCCTGAC CGGAGCGCTC
ATCGGCTCCA ATGTCGGCGA ACGGAGTTGG GCCACGGCTA TTGTGGGCGC TGGAGCTGGC
CTGCTGCTCG GCTATGTGGT GGGCAATGAA ATGGACAAAT ACGACAAATC CATGGTTTCC
CGCACCCTGG AAACCCGCCC GTCGAGCACC ACCAACACCT GGGTCAACCC GGATACCGGC
AACCGCTACG CGGCCACCCC GGGTGCTGCC TACCAAGGCA CGCAGGGGCA GGTCTGTCGC
CCCATCCAGA TCGAGAGCTG GATGGACGGC CGCCGTGAGA TGGTCGACGC CCGAGCCTGC
CGCCAACCCG ACGGTTCCTG GGTCCTGCAA TAG
|
|---|
| Protein sequence | MSKDIIAILL AICLFGLSAC ASNTSKAQQG ATLGALTGAL IGSNVGERSW ATAIVGAGAG
LLLGYVVGNE MDKYDKSMVS RTLETRPSST TNTWVNPDTG NRYAATPGAA YQGTQGQVCR
PIQIESWMDG RREMVDARAC RQPDGSWVLQ
|
|---|
| |