Gene Dret_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1836 
Symbol 
ID8419677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2105484 
End bp2106599 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content60% 
IMG OID645038420 
ProductRhodanese domain protein 
Protein accessionYP_003198698 
Protein GI258405956 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA GAAAGATTCT TCGTTTTATT CTTATCGCAG CGGTCCTGCT CCTTGGCGTG 
GTCTGGTCCC TGGCCTCTGC TGAACAGCCC GGTACCCAGG GCCATTCCGG CTATCCGAAC
GGGCAATTCC TGTGCACGGC CCAGTGGCTC AAAACTCAGG GGCAAGACCA GGGCGTGGTC
GTCATCGACG TTCGCAACGA CGAGCATTTC GACAATACCC TTATCCCCGG TGCCATCCGT
ATGCCGTGGA GCCTGTTTCG GACCAACGAC CGGGCCGGGA ATCTGGCCGA CATTTTCGTC
GGACTGGACA AGGCCCAGGA GATCCTGGGC GAGCACGGAA TCGCGCGGGG CTCGACCGTG
GTCCTCTATG ATTCCGTTGC ACGTGACGGC GGGGCCACAG CCTCGTACGT CTTTTGGGTG
CTCGATATGC TCGGGCATGA AAACAAGATA ATCCTGGAGC GGGGTATTGA CGGCTGGAAG
GAGGCCGGGG GCGACCTTGC CCAACAGCCG GCCGAACTGG AGTCTGTCCT CTATCAGGCC
CCGGCTGAAG AGATGGTCCC TCAGCGAGGC GTCAACGGAG ATTTTATCGC CAAGCGCCTC
GGTGATCCGT ATTACCAGAT CCTCGATGTC CGTTCGCAGG GCGAATATAC CGGTGAACTG
GCCAATACGG CCCTGGACGG GAGCGTGCTC AAACGCGGCC ATGTTCCCGG AGCGGTGAAT
ATACCGGACG CCTCGAACTG GACCGATGAA AAAACAAAAG ACATCAAGTC CTATGCGGAT
TTGCAGCAAT TGTACCGCGG CCTGGATCCC GGCAAGGCCA TTATCCCCTA TTGCCATTCC
GGGCGCCGTG GGTCCTTCGG GTACTTCATT CTGCGCCTGA TGGGGTTTTC TGATGTGCGC
CTCTATGAAC GCTCCTGGAA CGAATGGGGG CAGCATTCAC GTTTTTATCC GGTGCAGGCT
GCTGTGCAGC GGCCCACAGG ATCGTCCCTG CCCCAGGGCA GTAGCGCACA GGCACCGGCC
GCGGCTTCAG GTCCGTCGAC GCAACCGGCG GGAGCTTCCA AGCCGGCCCC CAAATCAGGC
TCGTCTTCGG GCGGGTACGT CTCTTGCGGA GGGTGA
 
Protein sequence
MQDRKILRFI LIAAVLLLGV VWSLASAEQP GTQGHSGYPN GQFLCTAQWL KTQGQDQGVV 
VIDVRNDEHF DNTLIPGAIR MPWSLFRTND RAGNLADIFV GLDKAQEILG EHGIARGSTV
VLYDSVARDG GATASYVFWV LDMLGHENKI ILERGIDGWK EAGGDLAQQP AELESVLYQA
PAEEMVPQRG VNGDFIAKRL GDPYYQILDV RSQGEYTGEL ANTALDGSVL KRGHVPGAVN
IPDASNWTDE KTKDIKSYAD LQQLYRGLDP GKAIIPYCHS GRRGSFGYFI LRLMGFSDVR
LYERSWNEWG QHSRFYPVQA AVQRPTGSSL PQGSSAQAPA AASGPSTQPA GASKPAPKSG
SSSGGYVSCG G