| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1796 |
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| Symbol | |
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| ID | 8419637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2064378 |
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| End bp | 2065793 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038380 |
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| Product | TrkA-N domain protein |
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| Protein accession | YP_003198658 |
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| Protein GI | 258405916 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.293303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTTT TAATTTGTGG AGCCGGGGAT ACCACGGCCC AATTGCTCAA ACAGATGGGC
GAGAATTGGG ACGTGGTTCT GGTCGATCCT GAGAAGGAAC GCTTGCAGGA CTTCGTGGCC
GCCCATCCCT GCATCCAGCG GATCCAAGCC GGTGACGCTT CGAGTCCTGT GGTGCTTGAG
GACGCGGGCC TGGAGAACGC GGACTATGTC CTGGCCTTGA CCGGATCGGA CAAGGTTAAT
CTGGCCATCG CTGAACACGC GAGAAAAAAA GAAGTCGGGG CTGTTCTGGC CCTGGCCCAT
GAACAGCTCG ACGTCCAAGC CTTTCGGGAT CTCGGGGCCA GGGTCATCCT GCCGGGCCGT
GTTTTGGCCC AGAATATCTA TCATTACCTG CAAGACCCGC GGATCAAGGT CCATCCACTG
GATATCACCG AGGCCGAGGT GGTGGAAATC GACGCGGCGG ACCATTTCGC GCTGGTCGGA
CGCCGCATTT CTGCCCTGGT CAACGCCGAA TGGCGCATCG TGGCCCTGTA TCGCGAGGGC
CGTATTCTTT TTCCTGAACC GGATATGCGG GTGGGCAAGA CGGATAGGTT GATCATTCTC
GGGCAGCGAG ACGTGTTCAA CAATGTCTGT TCGCTGATGG AGTGCGGTCT GCCCCATTTC
CCTCTGACCT ACGGTCAGAC GTTGGTCATT CAGCTCCCAG AGGGTTCAGG GGTTCAAGAA
GTGCTTCAGG AGGGGCTGTA TGTGACCCAG AATACCCGGG TGCAAAAGGT CAGAGTGGTG
GCCCCGGAGG ACACCGCTCC GGGGCAAACG ATGTTCGACC AATGGCCCCA GTCCCGTCTG
CCGCGGGTGG AGACCTACAG CGCGGAAGAA GATCTGCGTG TTTTGCACCG GGTCTGTCAG
GCCCAAAACA CCGGCCTGGT CCTCCGGCCT CCTCTGGTGG TCTCCTGGGC AGATATCTTC
AAGCGCCCGC CGCATGTCGA GTTGGCGCAT TCTCTGGGGT GCCCTTTGTT GCTGGGGCGT
GGCGCAAAAA GCTATGAACG CATAGCCGTG GCTTTCAACG GCTCGTCCGT AGCGGTGGCT
GGAATGGAGG TCGCCATTGA TGTGGCGCGG CAGACCGGGG GCACAATAGA AGCGATTGTG
GTTCAGGAAT CGGACGTGGT TCAAGGGCCG GGCGGCGGTG AGTGGGTCGA CGACGTGCTT
GCTTCCCTGC GCGAACTGGC CCATGTCCAC AAGATCGCCA TTGCAGAGCA ACTCCGGGAA
GGCAATCCGG TTCGGGAAAT TGTGGCCGCC GCTGCTGAAA GCGATGTCGT GGTCATGGGG
TGCTCCAGGG CGCAGAAGCG CTTGCTGACC CCGAATATTC CGGAATTGGT CACGCGCCGG
ACGAAAGGTT CTGTTTTGCT TGTTCCGGTG GTCTAG
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| Protein sequence | MRVLICGAGD TTAQLLKQMG ENWDVVLVDP EKERLQDFVA AHPCIQRIQA GDASSPVVLE
DAGLENADYV LALTGSDKVN LAIAEHARKK EVGAVLALAH EQLDVQAFRD LGARVILPGR
VLAQNIYHYL QDPRIKVHPL DITEAEVVEI DAADHFALVG RRISALVNAE WRIVALYREG
RILFPEPDMR VGKTDRLIIL GQRDVFNNVC SLMECGLPHF PLTYGQTLVI QLPEGSGVQE
VLQEGLYVTQ NTRVQKVRVV APEDTAPGQT MFDQWPQSRL PRVETYSAEE DLRVLHRVCQ
AQNTGLVLRP PLVVSWADIF KRPPHVELAH SLGCPLLLGR GAKSYERIAV AFNGSSVAVA
GMEVAIDVAR QTGGTIEAIV VQESDVVQGP GGGEWVDDVL ASLRELAHVH KIAIAEQLRE
GNPVREIVAA AAESDVVVMG CSRAQKRLLT PNIPELVTRR TKGSVLLVPV V
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