| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1751 |
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| Symbol | |
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| ID | 8419592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2015257 |
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| End bp | 2016435 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038335 |
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| Product | TraB family protein |
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| Protein accession | YP_003198613 |
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| Protein GI | 258405871 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.521048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACA CCCCTTCTTC ACTTCCCGAA AACATCCAAC ACGTCCAACT GGCAGATAAA
GAGGTCTACC TCCTGGGCAC CGCGCATGTC TCTCCAAGCA GCGTCCAGGA CGTCCAGGAC
AGTGTGGCCG CGCTTAGTCC GGACACCATC TGTATCGAGC TCTGTCCCTC GCGCTACCAG
GCCATGCGCA ACCAGGACGC CTGGAAAAAG ATGGATATCC TGCGCGTGCT TAAGGAACGC
AAGGCCGTAC TGCTTTTAGC CCAACTCCTG ATGACCGCGT TTTATCGCAA ACTGGGCGAA
CAACTCGGTG TCCAACCCGG CGCCGAAATG CTCGAAGGTG CCCGGCAGGC AGACGCCACC
GGAGCCCATC TCGTGCTGGC CGATCGCGAC GTGCAGATCA CCCTGCGGCG GGTTTGGGGC
TACCTCTCCT GGTGGCAAAA AATCAAAATG GCCTTTCAGA TCATGGTCTC CCTGCTGGCC
GCAGACGGCG TCGACGCCGA GCAGGTTGAA TCTTTGAAAG AACAGGACCA GCTTGAAGCG
GTCATGGAAA GTTTCGGCAA ATCTCTCCCC GAGGTCAAAA AGCGGCTCAT TGATGAGCGC
GACATCTACC TGGCGGAAAA AATCCGTCGC GCCCCAGGGC AAAAAATCCT GGCCGTGGTT
GGCGCCGGGC ATGTCGCCGG CATCCGCGAG GCCGTGCATG AGGAAAACGA CCTGGCCCCT
TTGGAAACAA CGCCGCCGAA ATCGGTCTGG CCCACAGTAT TGAAGTGGGC GATTCCGGCG
CTGATCATCG GCCTGCTGGT TTACGGATTT TTCCAGGGCG GCGCCGCCCA TTCCATTGAA
TCCATCTCCA TCTGGATCCT GGTCAACGGG GTTTTGTCCT CTCTGGGCGC AGCCCTGGCC
CTGGCCCATC CCTTGACTAT CCTGATCACC TTTGTTGCGG CCCCACTGAC CAGTCTCAAT
CCCATGTTCG CAGCCGGCTG GGCGGCCGGC ATCGTCCAGG CCTGGGTCCG GCGTCCGACC
GTCACCGACC TTGAAGATCT GCCTCTGGCT CTGACCAGCA TCAAGGCCTT CTGGTTCAAC
CCGGTTTGCC GAATCCTTCT CGTTGTGGTA CTGGCCAATC TCGGGAGCTC GTTGGGATCC
TTCGTCGCCG GAAGCTGGAT TGCTGTGCGA AGCTTTTAA
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| Protein sequence | MSDTPSSLPE NIQHVQLADK EVYLLGTAHV SPSSVQDVQD SVAALSPDTI CIELCPSRYQ
AMRNQDAWKK MDILRVLKER KAVLLLAQLL MTAFYRKLGE QLGVQPGAEM LEGARQADAT
GAHLVLADRD VQITLRRVWG YLSWWQKIKM AFQIMVSLLA ADGVDAEQVE SLKEQDQLEA
VMESFGKSLP EVKKRLIDER DIYLAEKIRR APGQKILAVV GAGHVAGIRE AVHEENDLAP
LETTPPKSVW PTVLKWAIPA LIIGLLVYGF FQGGAAHSIE SISIWILVNG VLSSLGAALA
LAHPLTILIT FVAAPLTSLN PMFAAGWAAG IVQAWVRRPT VTDLEDLPLA LTSIKAFWFN
PVCRILLVVV LANLGSSLGS FVAGSWIAVR SF
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