Gene Dret_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1743 
Symbol 
ID8419583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2006445 
End bp2007188 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID645038326 
Producthypothetical protein 
Protein accessionYP_003198605 
Protein GI258405863 
COG category[S] Function unknown 
COG ID[COG2122] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.256952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.904611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC ACGCTTCACC CCAGCGCGCC TACCGCATGG ACGCCCGACC GCGCGAAAGC 
GAACTGGCAT TCCAGGTGGT CGTTGAAGAG ACCGACCTGT GGATCACGGC CCAAAAAGAT
CTGAGCCCCG AGGTCCACTC GGCTGTGCAC CGCCTGCGAG GGATGGTCAA AAACGCCCTG
GCCCTCTATG CGGATTTCGG CCCAAGCCTG CGGCCGGTCC CGGTTCCTGA CAGTGCACCG
GCCCTGATCC GCGAGATGGC CGAGGCTGCT CTGGCCTGGA ATGTCGGCCC CATGGCCTGT
GTCGCCGGCG CCATCGCCCA GGGGGTGGCT GACAGCTGCC AGCCCCACAG TCCGGAGCTG
CTGGTCGAAA ACGGGGGTGA TCTCTATCTC CACTCCACCC GCGAGCGGAC CATAGGGTTG
CTGGCCCAGC CAGACCAGGG TCTGCGGTTG GGGCTGCGCC TCAACGCCAC GGATTTCCCT
TGCGCCCTGT GCGCCTCGTC CGGCCGAATC GGCCATTCCC TGAGTCTCGG TTCCGGCGAC
CTGGTAGTCG TCCGGGCCCG GCAGGGCGCC TTTGCCGACG CCGGCGCCAC CGCTCTGGCC
AATCTATTGC ACAGACGGCA GGACGTTCAG CGTGTACTGG ACCAGGCCAA GGAGATGGCG
GCGCAGGGAC TGCAGGGCGT CTTCGCCCAA TACGACGATC AGATCGGAGT CTGGGGACAA
ATGGAATTGG TCGAGGTGGG GTAA
 
Protein sequence
MKHHASPQRA YRMDARPRES ELAFQVVVEE TDLWITAQKD LSPEVHSAVH RLRGMVKNAL 
ALYADFGPSL RPVPVPDSAP ALIREMAEAA LAWNVGPMAC VAGAIAQGVA DSCQPHSPEL
LVENGGDLYL HSTRERTIGL LAQPDQGLRL GLRLNATDFP CALCASSGRI GHSLSLGSGD
LVVVRARQGA FADAGATALA NLLHRRQDVQ RVLDQAKEMA AQGLQGVFAQ YDDQIGVWGQ
MELVEVG