Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1743 |
Symbol | |
ID | 8419583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2006445 |
End bp | 2007188 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645038326 |
Product | hypothetical protein |
Protein accession | YP_003198605 |
Protein GI | 258405863 |
COG category | [S] Function unknown |
COG ID | [COG2122] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.256952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.904611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACC ACGCTTCACC CCAGCGCGCC TACCGCATGG ACGCCCGACC GCGCGAAAGC GAACTGGCAT TCCAGGTGGT CGTTGAAGAG ACCGACCTGT GGATCACGGC CCAAAAAGAT CTGAGCCCCG AGGTCCACTC GGCTGTGCAC CGCCTGCGAG GGATGGTCAA AAACGCCCTG GCCCTCTATG CGGATTTCGG CCCAAGCCTG CGGCCGGTCC CGGTTCCTGA CAGTGCACCG GCCCTGATCC GCGAGATGGC CGAGGCTGCT CTGGCCTGGA ATGTCGGCCC CATGGCCTGT GTCGCCGGCG CCATCGCCCA GGGGGTGGCT GACAGCTGCC AGCCCCACAG TCCGGAGCTG CTGGTCGAAA ACGGGGGTGA TCTCTATCTC CACTCCACCC GCGAGCGGAC CATAGGGTTG CTGGCCCAGC CAGACCAGGG TCTGCGGTTG GGGCTGCGCC TCAACGCCAC GGATTTCCCT TGCGCCCTGT GCGCCTCGTC CGGCCGAATC GGCCATTCCC TGAGTCTCGG TTCCGGCGAC CTGGTAGTCG TCCGGGCCCG GCAGGGCGCC TTTGCCGACG CCGGCGCCAC CGCTCTGGCC AATCTATTGC ACAGACGGCA GGACGTTCAG CGTGTACTGG ACCAGGCCAA GGAGATGGCG GCGCAGGGAC TGCAGGGCGT CTTCGCCCAA TACGACGATC AGATCGGAGT CTGGGGACAA ATGGAATTGG TCGAGGTGGG GTAA
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Protein sequence | MKHHASPQRA YRMDARPRES ELAFQVVVEE TDLWITAQKD LSPEVHSAVH RLRGMVKNAL ALYADFGPSL RPVPVPDSAP ALIREMAEAA LAWNVGPMAC VAGAIAQGVA DSCQPHSPEL LVENGGDLYL HSTRERTIGL LAQPDQGLRL GLRLNATDFP CALCASSGRI GHSLSLGSGD LVVVRARQGA FADAGATALA NLLHRRQDVQ RVLDQAKEMA AQGLQGVFAQ YDDQIGVWGQ MELVEVG
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