Gene Dret_1701 details

Gene Information

• Locus tag: Dret_1701
• ID: 8419532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfohalobium retbaense DSM 5692
• Kingdom: Bacteria
• Replicon accession: NC_013223
• Strand: +
• Start bp: 1958120
• End bp: 1958503
• Gene Length: 384 bp
• Protein Length: 127 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 645038275
• Product: holo-acyl-carrier-protein synthase
• Protein accession: YP_003198563
• Protein GI: 258405821
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase)
• TIGRFAM ID: [TIGR00516] holo-[acyl-carrier-protein] synthase; [TIGR00556] phosphopantethiene--protein transferase domain

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.092305
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.0387574
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGTCG GGTTAGGAAT TGATATTGTC GAAACCGACC GCATCGCCCG CATCTGGAAT 
CGGTTCGGTG ACCATTTCAC CCGAAAGATC CTCACCGAAA AAGAGCGACA CGCCCTGGAC 
ACGCCGTCTG TTCCGGCGCT CGCCGCCCGT TTCGCGGCCA AAGAGGCCGG CGTCAAGGCC 
CTCGGGACAG GATTCAGTCA CGGCATCACA CCGAAGTGCC TGGAAATTCT TTCCGACGCG 
CACGGAAAGC CCCAGATAGC CTTTTTCGGT CCGGCCCGTA TTCAGGCCGA CGTCCTCGGT 
GTGGTCTCCT GCCATGTCAG CATGACGCAT GGCCGCGACA ACGCTGTGGC TGTGGTGGTT 
TTAGAAACGA AGACATCGCC GTAA 

 

Protein sequence

MIVGLGIDIV ETDRIARIWN RFGDHFTRKI LTEKERHALD TPSVPALAAR FAAKEAGVKA 
LGTGFSHGIT PKCLEILSDA HGKPQIAFFG PARIQADVLG VVSCHVSMTH GRDNAVAVVV 
LETKTSP