Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1679 |
Symbol | |
ID | 8419510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1931515 |
End bp | 1932342 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645038253 |
Product | Smr protein/MutS2 |
Protein accession | YP_003198541 |
Protein GI | 258405799 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.617343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTTA CATCATTTGA AGAACTTGCC CGGAACATGG AAAAGCAGGG CCAGAAAAAA GACGGGGCCA AAAATCCCAA AGCGGCCGGA ACCAAACCGG CCAGTCCCCG CTCCAAGCAA CGGCCTGCGA ACCAATCCCC TCCCACTGCC TCGAAGCAGA AGAAGGGGAC TGGCCCTGCA CGCCCGCAGT CGGGCTCGCG CTCCCCTGCC AATACCCCGG CGCAGGAGCG GGAACCGGAT GAGGAGTCGC GCCTTTTCCA GCAGGCCATG CAGGGAGTGC GCCCTTTGAA GGCCAATGGA CGCCAGGTCC CGGCCCCCAC AAACGTTCAC AACCCTCCGG CTCCGGATCA GTCCGAAGCT GAGGCCAAGG CCTATCTCCG GGAACTGGTC CAAGGCAACG TCGAATTCGA ACTGGAGCAC ACCTCGGAAT TTATCGAGGG CCACGTCCGG GGGCTCGACC AGCGCAAAGT GCGCAAGCTC AAGGCCGGAC AATACAGTTT TGAAGCCCAC CTCGATTTGC ACGGGGCGAA CACGGACGGC GCTAAACTCG AACTGCTGGA ATTCGTGCGC AGTCAATACC TCCTGGGGCG TCGCTGCCTG CTGATCATCC CGGGCCGGGG CCGCAATTCC CCCCAAGGCC GGGGGGTGCT GCGCGACGAA GTTCAGGCCT GGCTGACCCA GGACCCGCTC AAACGGGTTG TCCTGGCCTT TGCCACCGCT TTGCCCCGCC ACGGAGGCGC CGGGGCCCTG TATGTCTTAT TGCGAAAGTA CAAAAAATCC CACGGCAAGA TTTTGTGGCA AAAATACCCG CTCAATTCCG AAACCTGA
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Protein sequence | MRFTSFEELA RNMEKQGQKK DGAKNPKAAG TKPASPRSKQ RPANQSPPTA SKQKKGTGPA RPQSGSRSPA NTPAQEREPD EESRLFQQAM QGVRPLKANG RQVPAPTNVH NPPAPDQSEA EAKAYLRELV QGNVEFELEH TSEFIEGHVR GLDQRKVRKL KAGQYSFEAH LDLHGANTDG AKLELLEFVR SQYLLGRRCL LIIPGRGRNS PQGRGVLRDE VQAWLTQDPL KRVVLAFATA LPRHGGAGAL YVLLRKYKKS HGKILWQKYP LNSET
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