| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1652 |
|---|
| Symbol | |
|---|
| ID | 8419483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1904891 |
|---|
| End bp | 1906147 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645038226 |
|---|
| Product | Tetratricopeptide TPR_4 |
|---|
| Protein accession | YP_003198514 |
|---|
| Protein GI | 258405772 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.330664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACAAGGG ACACTCTCGC ATTTCTTGCT TCCTCCGGTC AGCAGGGGAC GGCGCCCCGT
ATTGCCAGGG ACTGCTTTGC CCGCTGGGGG CTTGTGATCG TCCTGGTTGT GGCAGTCCTG
GGCTACACGG GGACAGTGCA AAGTGCCACA CAACAAGAGG AACTCCTGTA CCGGGCCGAC
CAGGCCTATC AAAACCAAGC CTATCACAAC GTGCTCGACC TTCTGGCCCC CTTGCTCCAG
CCCGACGCTT CGCCAGGGCA TGCGGCTGTT TTTCTGTTGG CCGGCCACAG CCAGATGGCC
TTGGCCCGTT ACGACGAGGC GGTGCGACTT CTGCAGCGGG GATGCGAGCG TTTCCCGGAA
CATGTCCAGT TGCGCTCCAG TCTGGGACAG GCCGCACTCC AGGCCGGGGA CAACGCCAAA
GCTCTCACCG CTCTGACCCG GGCGAGCACT CTCAATCCCG ACGCCCAGCG TGTCCCTCGG
CTGCTGTACC AGGCAGCCGT AGCCGCATGG CGGCTGGAAC GTCCTGCGCG CTGCAGCGAG
CTTCTCCAGG GCGCCCTGAA ACGACAGCCC GGGCCGGCCC CGGAGCATTG GCTGGAATTG
CTCGTTCACG CCAACCTTGA AACCGGGAAC AGGGTCAAGG CCCGCGAGGG GAGCGATGCC
CTGCTCGAAC GCGCCCCGGA CAAAGCCCGC TACTGGCGAT TAGCCGCACA CGTGGCCTGG
GCAGGCGACA ACCGCCTCCG AGCCGCCGTC TGTCTGGAAA CCGCCGCCCG GCTCTCCCCC
CCAACACCGG ATCAACGACG GTCCCTCGCC GACCTGTACG CCTCGCTGGA CGCCCCGCTT
CGAGCCGCGG CCCTCCTCCA GGACATCCCG ACGCCCTCCC GCACCACTGC GGACACCCTC
CGCTTGAGCC GACTCTATGA ACGGGCTCTG CGCCAAGAAA AAGCGATTGC AACCCTTGAC
CAGGCTCCGG CTACGCCGCA AACCCGCCTG CGCCGCGGTG AAATCCTGTA TCGTGGCGGC
CGCTTTGCCC AGGCCCAGAC CACGCTGGCC TCCATCTGTG ACAGCCGCCA CTCGCGGGCC
TGTCTTTTGG CGGGCTACGC CGCATGGCAC CGCACACAAT GGGACCAGGC CCGCGGCTTT
CTCTCACGCA TCGGCCCCAA CGCGACCTGT GCCGATCAAG CCGCCTCCGC CCTGGCCGTC
CTCGATTCCC TGGAGGAGAC TTCCCGTCCG GAGCAGCCCG GCAGAGCCAC AGATTGA
|
|---|
| Protein sequence | MTRDTLAFLA SSGQQGTAPR IARDCFARWG LVIVLVVAVL GYTGTVQSAT QQEELLYRAD
QAYQNQAYHN VLDLLAPLLQ PDASPGHAAV FLLAGHSQMA LARYDEAVRL LQRGCERFPE
HVQLRSSLGQ AALQAGDNAK ALTALTRAST LNPDAQRVPR LLYQAAVAAW RLERPARCSE
LLQGALKRQP GPAPEHWLEL LVHANLETGN RVKAREGSDA LLERAPDKAR YWRLAAHVAW
AGDNRLRAAV CLETAARLSP PTPDQRRSLA DLYASLDAPL RAAALLQDIP TPSRTTADTL
RLSRLYERAL RQEKAIATLD QAPATPQTRL RRGEILYRGG RFAQAQTTLA SICDSRHSRA
CLLAGYAAWH RTQWDQARGF LSRIGPNATC ADQAASALAV LDSLEETSRP EQPGRATD
|
|---|
| |