Gene Dret_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1593 
Symbol 
ID8419423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1842840 
End bp1843271 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content61% 
IMG OID645038166 
Productnitrogen-fixing NifU domain protein 
Protein accessionYP_003198455 
Protein GI258405713 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.609596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACAT TGGATTCTAT TCTGGCGGAC ATCCAGGATG AGGCGGATCA GGACGCGCAG 
ACGTACCTCG GCGATACGGC GTATGCCTTG TGGCGTAATC CGATCCATGT CGGCACTTTT
TCCCAGCCCG ACGGGGTAGG CGATCTGACC GGCGAGTGCG GGGATTCGAT CCAGATCGAA
ATTTTGGTCC GGGAGGGCCG GATCCACGAG GCGCGCTTCT GGACCGACGG GTGTGGACCG
AGTATCGTCA GTGGGTGTGT GGCCTGTGAA CTGGCCTGCG GCAAATCCCT GGAGGAGGCG
GCGTCGCTTC AGGCCGGGGA GATCCTGGAA TATCTCGGCG GATTGCCCGA GGACAAGGAG
CATTGCGCCC ATCTCGCGGC CCGGACTCTC CAGGAAGCCG TGGATGCGTA TATGCGCTCT
CGCCAAGGGT AA
 
Protein sequence
MDTLDSILAD IQDEADQDAQ TYLGDTAYAL WRNPIHVGTF SQPDGVGDLT GECGDSIQIE 
ILVREGRIHE ARFWTDGCGP SIVSGCVACE LACGKSLEEA ASLQAGEILE YLGGLPEDKE
HCAHLAARTL QEAVDAYMRS RQG