Gene Dret_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1582 
Symbol 
ID8419412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1833016 
End bp1833498 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content65% 
IMG OID645038155 
Productphosphatidylglycerophosphatase A 
Protein accessionYP_003198444 
Protein GI258405702 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.693216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCA CCGCCCCGGA AAACCTGAGC CAGCGCCTGG CCCTCGCCGT GTCCACCCTC 
GGCCCCATCG GCCACCTTCC CAAGGCCCCA GGCACCTGGG GCGCTCTGGC CGCGACACTG
GCCGCTCCAA TCGTCTTCCT GCCTCTGTCG CTGCCTCTGC GGCTCCTGGT CCTGGTAGCC
ATCTTCCACC TCGGGAGCAT GGCCGCCGGA AGCGCCGAAA AAAGCCTCGG CCGCAAGGAT
CCGGGTCAGG TCATTATCGA CGAGTTGTTG GGGCAATGGG CGGTATTGCT GCCGTTCACG
CTGTTGCCCT GGTGGCAGTT GCTGATCGGG TTTGCCCTCT TTCGCTTTTT TGATATCGTC
AAGCCGTGGC CGGTTCGGGC CTCTGAGACT TGGCTCGCCC AGGGCTACGG TGTCATGCTC
GATGACCTCT TCGCTGGACT TTACGGGGCC CTCGGCCTGG CCGTGGTCCG CTTCCTGGTC
TAA
 
Protein sequence
MPLTAPENLS QRLALAVSTL GPIGHLPKAP GTWGALAATL AAPIVFLPLS LPLRLLVLVA 
IFHLGSMAAG SAEKSLGRKD PGQVIIDELL GQWAVLLPFT LLPWWQLLIG FALFRFFDIV
KPWPVRASET WLAQGYGVML DDLFAGLYGA LGLAVVRFLV