| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1564 |
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| Symbol | |
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| ID | 8419394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1809033 |
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| End bp | 1810247 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038137 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_003198426 |
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| Protein GI | 258405684 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.228018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACACG AACACCGCCC CCTGGCCGAG CGGATCCGTC CCCATTCCCT GGATGACTTC
ATTGGCCAGA CCCACCTGCG CCAGCGTCTC CAGGCCCTGC AAAACGCCTC GCGTCTCTCC
AGTCTGCTGT TTTTCGGCCC CCCGGGCTGC GGTAAGTCGA CGTTGGCCCT CATGTTCGCC
AAGGCCCACG GCGGCGCCTA TCTCCGGGTC AGCGCACCCG AAGTCGGCCT GGCCAATCTG
CGCAAACAGA TCCAGAACAC GGACATCCTC ATTCTGGATG AACTGCACCG CTTTTCCAAA
GCCCAGCAGG ATTTTTTTCT GCCGCTTCTG GAAACCGGCG ACATCATCCT CCTGGCTACG
ACCACGGAAA ACCCGTCCTT CAGCATCACT CGCCAACTCC TGTCACGGCT GCATGTCCTG
CGCCTGCGCC CCCTGGGTCC ACAGGAACTG CTCGACCTCG CCCAGCGCGG GCAACAGGAA
CTCGGTCTGC ACCTGCCGGA CAAGAGCCTG GAACTGCTCT GCACGTATGC TGGCGGCGAC
GGACGCACCC TGCTCAATCT TCTTGAATAC GCCGAAGAAC TCTCCGAGGA GCAACGTGAT
CCGGAACGGC TCAAAAGCGC TCTGCCGGAA ATCGTCATCC GCGGCGATCG CGGCGGTGAC
ACCCATTATG AACTCGCCTC AGCGCTTATC AAATCCATCC GCGGCAGCGA CCCGGACGCG
GCCCTGTATT ACCTGGCCAG CATGCTCGAA AGCGGCGAGG ACCCGCGGTT TGTCTGCCGC
CGCCTGGTCT TGTCGGCTTC AGAGGACATC GGCCTGGGCG ACCCCTCGGC CCTGACCCTG
GCCGTATCCT GCCAACAGGC GGTCGAGACC ATCGGCATGC CCGAAGGTTT CATCCCCCTG
GCCGAGACTG TCGTGTATCT CGCGCTGGCG CCGAAAAGCA ATTCCACCTA CAGCGCCTAT
CTCGCCGCAC AAAAGGAAAT CCGCGACAAC GGCCGCAAGC CTGTGCCGCT GCACCTGCGC
AACCCCTCGA CATCCCTGCA CAAGCAATGG GGCTACGGTC ATGGGTATAA ATATCCCCAT
GCCTATCCCG GCAGCTTCGT CTCCCAGGAG TACCTGCCCG ACGGACTCCA GGGCCGCCGC
TTCTACCAGC CCAAGGACCA AGGCCAGGAA CCCCGCCTGC TGGCTTGGCT CAAGAGTCGG
TTGAAGAAGT TTTAA
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| Protein sequence | MTHEHRPLAE RIRPHSLDDF IGQTHLRQRL QALQNASRLS SLLFFGPPGC GKSTLALMFA
KAHGGAYLRV SAPEVGLANL RKQIQNTDIL ILDELHRFSK AQQDFFLPLL ETGDIILLAT
TTENPSFSIT RQLLSRLHVL RLRPLGPQEL LDLAQRGQQE LGLHLPDKSL ELLCTYAGGD
GRTLLNLLEY AEELSEEQRD PERLKSALPE IVIRGDRGGD THYELASALI KSIRGSDPDA
ALYYLASMLE SGEDPRFVCR RLVLSASEDI GLGDPSALTL AVSCQQAVET IGMPEGFIPL
AETVVYLALA PKSNSTYSAY LAAQKEIRDN GRKPVPLHLR NPSTSLHKQW GYGHGYKYPH
AYPGSFVSQE YLPDGLQGRR FYQPKDQGQE PRLLAWLKSR LKKF
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