| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1529 |
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| Symbol | |
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| ID | 8419358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1772088 |
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| End bp | 1773206 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645038103 |
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| Product | cobalamin B12-binding domain protein |
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| Protein accession | YP_003198393 |
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| Protein GI | 258405651 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG AAATGCAGGA AGAGCTGTCA AGAATGGCAG TGTCCGAGAC TAGTGCTCAC
GCCTATCATG AGCACTTGAG CTTTCTCCTG GACCGGGTGA ACAAAAAGAT GGTCTCCCGG
CAAGATCTCG AGGATTTGAT CGGCCAAAAC CCCATGAACA TAATGTTTGA CAATCACCGC
AATCACGCGG TGTTCATGGA CAATGTCTTT CAATTGGGCT TGTTTTCTCT CCTGGTCAAC
ATTGTCCCCT GGGTCTATCG GGCCTACTGC AACCACGGAT TTTCCGCGAA CTATTTCCCG
GTCCATCTCA GGGCCTGGAA AGAAACGCTG GAGGAAACCT TCAGTCCTGA GACCTCGGAG
CCCCTATTGC GGGTATACGA CTGGATGCTT TCCCATCACG AAGATTTTTT TGCGCTGTCC
GAGGCGCCGG CTTCTACAAA TGCCGCCTCA TCTGCTCCAG AGAGTGAGGA CAAGGATCGG
TTGCTGCAAG CTCTTATTGA CGGAGACCGT AGGACCGTTT TGCGAATAGG TCATGAAAAC
GCGGAAACAC CGAAGGATCT AAAGTCCTTT TATCACAATC TCTTGCAGCC GGTTATGTAT
CGGATCGGTG AATTGTGGGA GCAAGGTGAG ATTTCCGTTT CCCGAGAACA TCTGGCCTCT
GCTCTGGCCA ATACGGCAGT GTCCAGCCAG TATGTCCGGG TCATGTCCGA TGTTGAACCG
TGGAAGGGAA AGATCCTTGT CTCGGCAGCC TCAAATGAGT TCCATGTCCT TGGGGCCCAG
ATAATTGCCA ATTGCCTAGA GGCCGAAGGA TGGGAAGTGG ACTATCTCGG GGCGAATACC
CCTTCAGAAG ATCTTGTGGG CTATATCCGG GATCAACGTC CGGATGTAGT GGCCCTATCT
GTGACCATGC CCTTTAACCT TATCCAGTGC AAGGATATCG TCGAGCACGT CAAGAAGGAG
TTTCAGGAGT CCCGGCCCAA GATCCTGCTC GGAGGTCTTG CCTTTGCGAC TCATTCGGAA
CTCGTCCAGC GGATCGGCGG AGACGGATAC GCCGAGGATT GCACTCAGGC AATCGAGCTT
GTTGAACAAT GGAGCGGAGC CCCATATGTC CGTGAGTGA
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| Protein sequence | MKKEMQEELS RMAVSETSAH AYHEHLSFLL DRVNKKMVSR QDLEDLIGQN PMNIMFDNHR
NHAVFMDNVF QLGLFSLLVN IVPWVYRAYC NHGFSANYFP VHLRAWKETL EETFSPETSE
PLLRVYDWML SHHEDFFALS EAPASTNAAS SAPESEDKDR LLQALIDGDR RTVLRIGHEN
AETPKDLKSF YHNLLQPVMY RIGELWEQGE ISVSREHLAS ALANTAVSSQ YVRVMSDVEP
WKGKILVSAA SNEFHVLGAQ IIANCLEAEG WEVDYLGANT PSEDLVGYIR DQRPDVVALS
VTMPFNLIQC KDIVEHVKKE FQESRPKILL GGLAFATHSE LVQRIGGDGY AEDCTQAIEL
VEQWSGAPYV RE
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