Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1504 |
Symbol | |
ID | 8419333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1744540 |
End bp | 1745610 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645038078 |
Product | hypothetical protein |
Protein accession | YP_003198368 |
Protein GI | 258405626 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00430527 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGGCA AATCGATCTT TATTCTGGCC TGCGGCATTC TCCTCTTGTG TGTCTGGCCG GTGCAGTCCG ACCAGCAGCA GGACTGCTTC AGAACCAGCC TGCACCACAC CACCCGCGGC ATGGCCACCT GGTATGACGC GGACAACGGT TTCAGCGCCA TCACCAATGT CCCCTACAAG GACCTGGGAT GTAAAAATTG CCATGCCACC TCCTGCAACG ATTGCCATCT TGAAAAATCC GGTGAGGGCT TTGCGTACTC CACGGCCAAG GCACGGCAAT CCTCGACTTG TCTCAAATGT CACGCCCGGG AGAAGGCCAC CATCGGGATC GACACCGCCA GAAACTCCCT CGGCGTTCAT ATCAAGGCCG GCATGCAATG CGCGGATTGC CATTCAGCCA GGGAAGTCCA CGGTGATGGA ACCTGCTATG AAAGCATGCG CGCGCCAGGG GCAATGGATA CGGCCTGCAC AAATTGCCAC ACCGAGGACA GCACCACCTA TCCGGCCATC CCCCCGACCG AATCGCATAT GGTCCACAGC GGCAAACTCG ACTGTACAGC CTGCCACGTG GAAAACTCCA TGACCTGCTA CAATTGCCAT TTCGGTGTTT TGCAAAAGAC CAAGAGCAAA CCAAAAAGCA TGGTCACCAA AACCAAGGAT TTCCTGCTGC TTGTCAAATA TAACGGCAAA TTCATGAGTG GAACCATGCA GACGCTGGTT GGCCCCGATA ATTACCCCTT CGTGGCCTAC GTTCCCTATT TCACCCATTC AGTGACCGAG CAGGGGCGAA AATGCGAAAG CTGCCACTCC TCCAAGGCCC TCAAAGAGTT GGCTGCGGGC AAGTCGTTCA ATGCCTCCAC CTACAAGGAC GGGAAACTCA GTTTTTTCGA GGGGGTCATC CCGGTGGTTC CCGACCAGAT CAACTGGACT TTTCTGGAGA AAGCCGGGGA ACAGTGGACG CCGTTTGAGC CGCCAGCCAA ACCGCTGGTC CAGATGGCGG TCTACGCTGA GCCCTTTACC GACGACGAAC TGGAGATGAT GAACATGGAA CAGGTTTACA CCGGACAATG A
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Protein sequence | MKGKSIFILA CGILLLCVWP VQSDQQQDCF RTSLHHTTRG MATWYDADNG FSAITNVPYK DLGCKNCHAT SCNDCHLEKS GEGFAYSTAK ARQSSTCLKC HAREKATIGI DTARNSLGVH IKAGMQCADC HSAREVHGDG TCYESMRAPG AMDTACTNCH TEDSTTYPAI PPTESHMVHS GKLDCTACHV ENSMTCYNCH FGVLQKTKSK PKSMVTKTKD FLLLVKYNGK FMSGTMQTLV GPDNYPFVAY VPYFTHSVTE QGRKCESCHS SKALKELAAG KSFNASTYKD GKLSFFEGVI PVVPDQINWT FLEKAGEQWT PFEPPAKPLV QMAVYAEPFT DDELEMMNME QVYTGQ
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