| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1475 |
|---|
| Symbol | |
|---|
| ID | 8419304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1705926 |
|---|
| End bp | 1706597 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645038050 |
|---|
| Product | cobalt transport protein |
|---|
| Protein accession | YP_003198340 |
|---|
| Protein GI | 258405598 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000182828 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGTCCGCGC CAACTGATCC CATTCACAAC CACTTTGCGG CCCCGGGCAC GGCCCCCCTT
CTCCGGGCCG GGCTCCAGCT GCTCATCGCT ACCGCTCTGG CCGGCTTTGC TTTGCTTTCC
CGTTCCTGGT TTTTGGTGGC TGTTTGCGCG GGATGCGAAG CCGTCTTTCT CCTGGTCTGC
CGGCCGCGAC TGCGGGACGT TGCCCGCAAA TTCTGGATTT TCGGCCCCCA ATTTGTGCTT
ATTGTCGGCC TGTATATACT CCGCCTCGGG CCAAGCCCGG GAGTTATCAG CGAAGGCGCC
AGGGTCGCCC TCCAGATCTG GCTCGCTTTT CTCCCCGGAA TCGTGCTTTA CCACAGTCTG
TCCTGGGCTC AGGCCAGGCG TTTGGCGCAT CTGCTCCTGC CACAGCAGAC CGCCTTCGCC
CTGTGCACCG CAGTGACGTT TGTGCCCATG CTCCTGCGGG AATGCCGTGA AATCTACCGG
GTTCAACTCC TGCGCGGCGC CCGGCTCCGA CCAAAGGACA TGCTCTCCCC GGCCGGATGG
CGGGATCTGG CGCACAGCTT GCTGTTTCCT ACTGTTTTCC AATGCCTGAA AACAGCCCAC
GAACTCGCTC TGGCCGCCAG ACTCCGCGGT TTTCCAGGGC CGGCACGCAA ACGGATCTGG
CCGTATGATT AG
|
|---|
| Protein sequence | MSAPTDPIHN HFAAPGTAPL LRAGLQLLIA TALAGFALLS RSWFLVAVCA GCEAVFLLVC
RPRLRDVARK FWIFGPQFVL IVGLYILRLG PSPGVISEGA RVALQIWLAF LPGIVLYHSL
SWAQARRLAH LLLPQQTAFA LCTAVTFVPM LLRECREIYR VQLLRGARLR PKDMLSPAGW
RDLAHSLLFP TVFQCLKTAH ELALAARLRG FPGPARKRIW PYD
|
|---|
| |