Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1468 |
Symbol | |
ID | 8419297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1696925 |
End bp | 1697620 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645038043 |
Product | anti-ECFsigma factor, ChrR |
Protein accession | YP_003198333 |
Protein GI | 258405591 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.732817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0198654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGGG GACTGAGGCC CCGTATTCTG GAGGGATGCA CAATGGAGCT GTCCGACGCC GTCAACTGGT ATTACTTGCT GCGCGAATAC TACCTGCTCT ACCGCACCCT GTCCGCCGGC GGCAGCAAGC CCATCCGGCG CCACAAACGC GACGTTCGCG AACGCATCAG CCAGACCATG CACCCGAAAA CGCCGGTAGT GCACCGCGAA CCCGCCGAAA AGCCGGTCTG CGCCTACTTG CAACGCGCCC TGGACCAGGC TCCGGCTGCC GATCGCGGGG TGGTCACCAC GCTGCATTCC TTGCGGCCCC ATTTGCATTG GGAATACGGC TACCAGCGCT TGCCCGCCCA TCTGGCCCGA AAATACGCCT ATGCCGAATG TGTGGGGCCG CGCGGGCCAG TGGTCTCCGA GCGTCTGATT CTCGGGCTGG TCCTGCTCGC GCCAGGCACC ACCTACCCCA CCCACGCCCA CCAGACGATC ACCGAATCCT ATATCGGCCT CAGCGGGGCC TTTTCTGAAA ACGATGTCGG GGTCTTCGGC CCCAAGTCGC TGATTTTGAA CCCGCCAGGC CGGCGCCACC GGATCACGGT CGACAGCTAC GAGCCCTGCC TGCTCGCCTT TGCCTGGACC GGCTACAGCC GGGATCTTGA TGATCCAGGC ATGTGCTTTA GCCCCAGGAC CCCGCAAGCG CTGTAA
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Protein sequence | MERGLRPRIL EGCTMELSDA VNWYYLLREY YLLYRTLSAG GSKPIRRHKR DVRERISQTM HPKTPVVHRE PAEKPVCAYL QRALDQAPAA DRGVVTTLHS LRPHLHWEYG YQRLPAHLAR KYAYAECVGP RGPVVSERLI LGLVLLAPGT TYPTHAHQTI TESYIGLSGA FSENDVGVFG PKSLILNPPG RRHRITVDSY EPCLLAFAWT GYSRDLDDPG MCFSPRTPQA L
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