Gene Dret_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1441 
Symbol 
ID8419270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1673184 
End bp1673660 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID645038016 
Productprotein of unknown function DUF1499 
Protein accessionYP_003198306 
Protein GI258405564 
COG category[S] Function unknown 
COG ID[COG4446] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0342472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0503993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAAAAG TGCTTGTTGT TCTGGCGCTG ATCGTGTGTG CAGCCGGGGG AATGTTGTTG 
GCCCTGGCCT TGCTCTCGCA TTGGCGAACC CCTTCATTGG GCGGTCCCGA AGCCGGCCTC
ATGGCCTGTC CTTCGCAGCC CAATTGCGTC AACAGTCTGA CCGGGGAGGA CAGGCGTGCA
GTGGCCCCGT TTGCCTATCA GGGACAAGCG GACCAAGCCT GGGACAGACT GCGCCGCCTC
GTGCAGTCCG TGGGCGGAGT GGTCCAGCAG GAGACAGAAG GGTATCTCTG GGCGACGTTT
CGCAGCCCGG TGTGGCGGTT TGTGGACGAT CTCGAGTTGT ATCTGGATCA GAAAAACAAG
CTGATCCATG TCCGGTCCGC TTCCCGTGTG GGGTACTCGG ATCTGGGAGT CAACGCCAAG
CGGGTCGCCC GATTGCACGC CTGTTGGGCA GAGGAACGGG CGAATTGTTC AAAATAG
 
Protein sequence
MGKVLVVLAL IVCAAGGMLL ALALLSHWRT PSLGGPEAGL MACPSQPNCV NSLTGEDRRA 
VAPFAYQGQA DQAWDRLRRL VQSVGGVVQQ ETEGYLWATF RSPVWRFVDD LELYLDQKNK
LIHVRSASRV GYSDLGVNAK RVARLHACWA EERANCSK