| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1387 |
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| Symbol | rnc |
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| ID | 8419216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1620984 |
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| End bp | 1621697 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037962 |
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| Product | ribonuclease III |
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| Protein accession | YP_003198252 |
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| Protein GI | 258405510 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.023535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.598576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGATT CGGTATTGCG CTTGGTACAA CAACGTCTGC AGTATACATT CCGCGACCAG
CAACTCTTGC TTCTCGCCTT GACCCACAGT TCGTACGCCA ATGAACACCC GCATATTCAG
GAACACAATG AGCGATTGGA ATTTCTAGGT GACGCGGTAC TGGAACTCGC CATTTCGGAA
GAGTTGTATC TACGATATCC CGAGGCCCCT GAGGGGTCGC TGACCAGTTT GCGGTCCAAG
CTGGTCAGTG AACCTGCATT GGCGGCCTTG GGGCGGCAAT TGGAGATCGC CCCGGCTCTG
TTTTTGGGCA GGGGGGAGGA ATCACAGGGC GGCCGGGAGC GGGACGCTAT TTTGTGTGAT
GTGATGGAAT CCATTTTTGG AGCCATTTTT CTGGACTCGG ATTATGACCG GGCCAAGACC
TGCATTCTCG AGCTCTACGT TGATAAATGG CCTTCAGCCC CGAGTCTCGG GCATGAACGG
CTTCGTGATT TCAAGAGCCG GTTGCAAGAA TGCACCCAAC AATTGTTCAA GGACCGTCCG
GTCTACCATC TGGTGGACAG TACCGGTCCG GAACACGCCA AGGTCTACCA TGTCCGTGTC
GATCTGCCCA ATGGCAGTCA GGCGAGTGCG GCGGACAGCA GCGTCAAAAA AGCCGAACAG
CAGGCGGCGC GCAAAGCCCT GGAAAGTCTC CAGGCGCTCG AGGCCAGGAA GTGA
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| Protein sequence | MDDSVLRLVQ QRLQYTFRDQ QLLLLALTHS SYANEHPHIQ EHNERLEFLG DAVLELAISE
ELYLRYPEAP EGSLTSLRSK LVSEPALAAL GRQLEIAPAL FLGRGEESQG GRERDAILCD
VMESIFGAIF LDSDYDRAKT CILELYVDKW PSAPSLGHER LRDFKSRLQE CTQQLFKDRP
VYHLVDSTGP EHAKVYHVRV DLPNGSQASA ADSSVKKAEQ QAARKALESL QALEARK
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