| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1382 |
|---|
| Symbol | |
|---|
| ID | 8419211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1614853 |
|---|
| End bp | 1615659 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645037957 |
|---|
| Product | MltB |
|---|
| Protein accession | YP_003198247 |
|---|
| Protein GI | 258405505 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.722344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.65352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTTG CAACACGGCT CGCTCTTTTT CTTGTGCTGG TGGCGCTGCC CTTAACGGCT
CAGGCCCAGT CCGGCTGGCA GCCACTTATC GAACGCCTTG CGGCCGACGG CTACGACCAG
GCCCGACTGC AAACCATCTT TTCAGACCCG CGGGCCGAAT TTCTCGAATG GGTTATTCCC
AAAAAAAGCA CCCATTCTGA AGCGGCTCTC GACTACGAGC AATTCCTTCA AGACGAGAGC
AGACAACGCG CCGCCACCTT CCTGGACACG CACCGCTCTC TGTTGGCGCG CATAGAGGCC
ACCTACAATG TCGCCCCTGA AATCCTGACC GCGCTACTCG AGGTGGAAAC CCGCCTTGGA
AACTACACCG GGCAGACCAG AACGGTAAAT GCCTTAGCCA GCCTTGCCCG CGGTGGCATG
GACGACAAGG CGAATGCTGC GGCCAAACGC CAAGGGCAAT GGGCCTACAA GGAACTTAAA
GCCCTGCTCG ATTGGCGCCC GCAGAGCGGG GCCGAGCTTT TAAAACTGCG CGGCTCTCCC
TTTGGGGCCT TTGGTATCCC CCAATTCATT CCATCCAGTG CCGCCGCCTA CGGCCAGGAT
TTCGACGAAT CAGGCAGGGT CGACCTCTTC AGTCTGCCCG ACGCCCTGGC CAGCGCCGCG
TTGTATCTGC AAAAACACGG CTGGACTCCC GATCTCGACC GCGAAGACAA GCTGCAGATC
ATCAAACATT ACAACCACAG CACCCCGTAC GCCAAGGCGG TCCTGGCCCT GGCCGAACGC
CTCAGCCGTG GTCCAGAGGC TGAATAA
|
|---|
| Protein sequence | MPLATRLALF LVLVALPLTA QAQSGWQPLI ERLAADGYDQ ARLQTIFSDP RAEFLEWVIP
KKSTHSEAAL DYEQFLQDES RQRAATFLDT HRSLLARIEA TYNVAPEILT ALLEVETRLG
NYTGQTRTVN ALASLARGGM DDKANAAAKR QGQWAYKELK ALLDWRPQSG AELLKLRGSP
FGAFGIPQFI PSSAAAYGQD FDESGRVDLF SLPDALASAA LYLQKHGWTP DLDREDKLQI
IKHYNHSTPY AKAVLALAER LSRGPEAE
|
|---|
| |