| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1300 |
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| Symbol | |
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| ID | 8419129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1521205 |
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| End bp | 1521657 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037876 |
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| Product | 3-dehydroquinate dehydratase |
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| Protein accession | YP_003198166 |
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| Protein GI | 258405424 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
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| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0501246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.27707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCACT TTCAGATTCT TGTCCTCAAC GGCCCCAACC TGGGACACAT CGGCCAGCGC
CAGCCGGAGA TCTACGGCTC AGCCTGCATG GAGGAGTTGT GCGGGCTATT GTCCCGTATC
CGCCCCGATC TGGCTGAAAG GGCCGCACTG CGTTTTTTCC AGTCCAATCA TGAGGGCGCC
TTGATCGACC GCTTGGAACG GGCCCGCCAG GAAGTCCACG GCGTGGTCTT CAATGCCGGC
GCCCTGACTC ACACCAGTCT GGCCCTGGCC GACTGCCTGG CCTGGATCAA GATCCCGTGT
GTCGAGGTCC ATCTGAGCAA TGTCTGGGCC CGGCCAGAAA CAATCCGCCA CACCACGTTG
TTGGCTCCCC ACTGCCTGGG TGTGGTTGCC GGCTTTGGAC TTATGAGTTA TGCACTGGCG
GCCGTGGCGC TGTGTGAACA TCTGGATTCG TAA
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| Protein sequence | MSHFQILVLN GPNLGHIGQR QPEIYGSACM EELCGLLSRI RPDLAERAAL RFFQSNHEGA
LIDRLERARQ EVHGVVFNAG ALTHTSLALA DCLAWIKIPC VEVHLSNVWA RPETIRHTTL
LAPHCLGVVA GFGLMSYALA AVALCEHLDS
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