| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1225 |
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| Symbol | |
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| ID | 8419053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1437349 |
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| End bp | 1438980 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645037800 |
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| Product | formylmethanofuran dehydrogenase subunit E region |
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| Protein accession | YP_003198091 |
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| Protein GI | 258405349 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0303] Molybdopterin biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.524983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCG GGTCGCATAC GTTTGAGGAA TTCAAGGAAA TCGCCCGGCG TTTCCACGGT
TTTCCCGCCC CGGGGCTGCT GCTCGGCGGG TATATGGTTG AAAACGCCAA AGCCAGGATG
CCTGAGGGGG TCCTGTACGA GGCGATGGTC GAGACCGGCA AATGTCTGCC GGACGCGGTG
CAGCTGCTCA CGGTTCTGAG TGTGGGCAAC GGCTGGATGC GGGTGGTCAA TCTCGGCCGG
TACGCGCTGT CGCTCTATGA CAAATACACC GGTGCGGGAT GGCGGGTGTA CCTTGATTCC
GACAAGCTCG ACCATTGGCC GCATATGCAA TCCTGGCTGA TCAAGTCGAC GCCCAAAAAA
GACCAGGACA CCGAAGCGTT GTACAGGGAA ATCGAAGCCG CGGGCGACAC GGTTTGTTCG
GCGTACCCTA TCCAGATCCA CGAGCGGTTC CTCGGCAAAT CGAGCATGGG TGAGATCGGC
TGGTGCCCGG TCTGCCGGGA ATACTACCCC ACCCGCGACG GGGCTGTCTG CCGGGGCTGT
CAGGGTGACG CGCCCTACGC CAGCATACCG GGCTTTCCCG GACTCGGGCA ACATCGAGCC
CAGCCTCACG CGGTTTCTCT GGAAGAAGCC GTGGGCAAGA CCGCGGTCCA TGATATGACC
CGGATCGTCC CCGGCGAGAC CAAGGGACCG GCTATCCAGG CCGGTCAGGT GATCACCGGG
GGAGACCTGT GCCGTTTGCA GCAAATGGGA CGGGAACGGG TCTATGTTCG GGAGGAGCTC
GGAGGCGTTG ACGGCTTCGT CCATGAAAAC GATGCGGTCC TGGCCTTTGC CGAGGCCATG
GCCGGCGAGG GGGTCACCTA TACCGCGCCG CCGAAGGAAG GGAAAATCGA TTTTCGCGCC
AGCCAGAGTG GCCTGCTCGT GGTCGATATC GAGCGGCTCC GGGGGTTTAA TTGTTTGCCC
GATGTCATGT GCGCCACCCG GCAATCCGAT ATCTATGTCG AGAAGGACAA GGCGTTCGCC
GGCACCAGAG CGATCCCGCT GTATCTGAGT GAGGACCGCT TCGAGGCCGC TTTGGCTGTT
TTGCGCGACG GCCCCCTTCT GCGTGTCGAG CCGTTGCGCC CGATGGACAT CGGCATTCTG
GTCACTGGCT CTGAAGTCTT TAAGGGGTTG ATCGAAGACA AATTCGCCCC CCTCATCCGG
GGCAAGGTCG AGCACTTTGG TTGCCGGGTG TGTGCCGAGG AGGTTGTTCC GGACGACCGG
GAAACCATCG CTGCTGCCGT GGCCCGTCTG CGGGAGGCCG GGGCTCAGCT GATCATCACT
ACCGCAGGCT TGTCCGTGGA TCCTGATGAC GTGACCCGGG CGGGGCTGCT GGATGCGGGG
ATGACAGACA TGGTCTACGG TGCGCCCCTG CTGCCTGGAG CCATGACCCT GATCGGCCGT
GTGGGCTCCA GCCGGATTTT GGGCGTGCCC GCCTGCGCTC TTTTTTACAA AACGACCAGC
CTGGATCTGC TCCTGCCGCG GTTGCTGGCA AACCGCCCCA TCACCCGTGC TGCTTTAGCC
GAGATGGCGG ACGGCGGATT CTGCCTGAGT TGTACGGTGT GTACCTTTCC CAAGTGCCCG
TTCGGCAAGT AG
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| Protein sequence | MNIGSHTFEE FKEIARRFHG FPAPGLLLGG YMVENAKARM PEGVLYEAMV ETGKCLPDAV
QLLTVLSVGN GWMRVVNLGR YALSLYDKYT GAGWRVYLDS DKLDHWPHMQ SWLIKSTPKK
DQDTEALYRE IEAAGDTVCS AYPIQIHERF LGKSSMGEIG WCPVCREYYP TRDGAVCRGC
QGDAPYASIP GFPGLGQHRA QPHAVSLEEA VGKTAVHDMT RIVPGETKGP AIQAGQVITG
GDLCRLQQMG RERVYVREEL GGVDGFVHEN DAVLAFAEAM AGEGVTYTAP PKEGKIDFRA
SQSGLLVVDI ERLRGFNCLP DVMCATRQSD IYVEKDKAFA GTRAIPLYLS EDRFEAALAV
LRDGPLLRVE PLRPMDIGIL VTGSEVFKGL IEDKFAPLIR GKVEHFGCRV CAEEVVPDDR
ETIAAAVARL REAGAQLIIT TAGLSVDPDD VTRAGLLDAG MTDMVYGAPL LPGAMTLIGR
VGSSRILGVP ACALFYKTTS LDLLLPRLLA NRPITRAALA EMADGGFCLS CTVCTFPKCP
FGK
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