| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1137 |
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| Symbol | |
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| ID | 8418964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1333395 |
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| End bp | 1334576 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037711 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003198003 |
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| Protein GI | 258405261 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0165472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.816566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAT TGCCCAATTT TTCCCGCTGT GCCCTTTGTC TCGGCGCGCT TTTTCTCGCG
CTGGCCCTGG CGGCCTGTCA GGACTCCACA TCGTCCCAGG ACCAGGCCCA GAACCAGGAG
GATCAGACCC AGGCCCTGAA GATAGGAGCC GTTTTACGTC TCTCCAAAGG CGCCTCCGAT
GGATTGCCGG CCCGCCACGG TATTGAAATC GCTGTGCAGG AAATCAACTC CCAGGGCGGC
ATCGACGGCC GGCCCCTGGA AGTTGTCTAC TACGACAGCA AGGACGACGC GACGACGGCT
GTGAACGCGG TCCAGAAACT CATTTCCGTG GACGAGGTCG AGGCCATCAT CGGTCCGATG
ATGAGCGGCA ATGTCCTGGC CGCTGCCCCA CTGTGTCAGC GCAACAATGT GGTTTTGCTC
ACTCCCACCG GCACCTCGCC GCGCATCTCC GAGGCCGGAT CGTATACCTT CCGCCTCTGT
TCCCGCATCG ACGATCAGGC CCGGGCCCTG GTCCAGGAAG CCCTGAGCCG AGTTGGAGCG
GACCCGACCG TGACTATCCT CTACAGCAAC GAACCCTACG GCAAGGGGTC CAAAGAACTC
TTCACGCGCT ACCTTGCCGA GCAGGACATC ACTCCGGCCA CTGTGGAATC GTTCCAGCGC
GGCGACAAAG ACTTCCAGGC CCAGCTGACC AAGATCAAAC AACTCAATCC GGACATCCTC
TTTGTCCCCG GATATCTCCA GGAAACCGCT CCGCTGATCA GCCAGGCCCG GCAGATGGGG
ATCAATGCCC TCAGCGTCGG TGTTTTCGGT GATATGGCCC CGAAATATAT TGAACTAGCC
GGCAAGGCCG CTGAAGGCCA CCTCATCGCT GGTGAATACA ATAAGCACAA GGACACCGAA
CACAACCAGG ACTTTGTCAA CGCCTATGAG GCGCTTCTGG CGGATCAGCC CAAGGCCCCG
GAAAACATCA TGTTCGCGGC TTTGACCTAC GACGCGGTCC ATCTTTTGCG GCAGTCCTTC
AGCACCGGGG CGACCACGGG CAGCGCCATC CAGTCCTTCC TGGACGAGTT GGAGGCCTTT
GACGGCATCA CCGGGACACT TTCCTTCGAT GCTAACGGGG ACGTCCAAAA AGGCGGGGTC
TACCTCTTTG AGGTCCAGAA CGGGACCTAC CGTAAACTGT AA
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| Protein sequence | MPQLPNFSRC ALCLGALFLA LALAACQDST SSQDQAQNQE DQTQALKIGA VLRLSKGASD
GLPARHGIEI AVQEINSQGG IDGRPLEVVY YDSKDDATTA VNAVQKLISV DEVEAIIGPM
MSGNVLAAAP LCQRNNVVLL TPTGTSPRIS EAGSYTFRLC SRIDDQARAL VQEALSRVGA
DPTVTILYSN EPYGKGSKEL FTRYLAEQDI TPATVESFQR GDKDFQAQLT KIKQLNPDIL
FVPGYLQETA PLISQARQMG INALSVGVFG DMAPKYIELA GKAAEGHLIA GEYNKHKDTE
HNQDFVNAYE ALLADQPKAP ENIMFAALTY DAVHLLRQSF STGATTGSAI QSFLDELEAF
DGITGTLSFD ANGDVQKGGV YLFEVQNGTY RKL
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