Gene Dret_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1132 
Symbol 
ID8418959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1328716 
End bp1329972 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content62% 
IMG OID645037706 
ProductPhenylacetate--CoA ligase 
Protein accessionYP_003197998 
Protein GI258405256 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTC TCGCCGCAAC CGCATTGCCC GCATCGCGTG ATGACCTTGA ACAGCTTCAG 
CTTGAACGGC TCCAGGCCAC CTTGCACCGG GTGCAGCGCC ATGTCGCCTT CTACCGGAGC
ATGTTTGCCG ACACCGGCTT CGATCCGGAT CAATGCGCCA GTCTCAGCGA TCTCCAACGA
TTGCCCCTGA CGAATGAAAC CGATCTTTGC CAGGCGTATC CGTATGACAT GTTCGCCACC
CCGCTTAAGG AAGTCGTCCA GATCCACACC ACCACCGGCC GGCATCCGGA ACCAGTGGTG
CACGGCTATA CCGAGCGCGA CCTGACCAAC GCAGCGATGC TCATGGCCCG GATCATGACC
GGCCTTGGCC TTGATGCAGA CGACGTCTTT CAGATCACGC TCAATTACGG TCTGGGGACC
GGGGCCTTCA CCTTTCACGA AGGCGCCCGC AAGCTCGGGG CCTCGGTCAT TCCCACGGCC
ACGGGGCGCA CGCCGAAGCA AGTCCAGATC ATGCGGGATT TCGGGACCTC CTGTCTGGTG
GCCACACCGA GTTACGCCCT GCGCTTGCTG CAGACCCTCA AGGACCAGGA TGTCTCACCG
GCCGCGCTGC GACTCAAATG CCTCCTGGTG ACCGGGGAAC CGTTCTCGGC CGACACCCGG
GCTGTCCTCG AGGACGGCTT CCAGGCCCAG ATCTATGACC TTTACGGTTT GAGCGCGGCC
TACGGGCCGG TTGTGGCTGC GCAATGCCGT AACCAATCCG TGCTCCATGT CCAGGAAGAT
CTCTTTTACG CCGAGGTTCT CGATCCTCAG ACGCACCAGC CTGTGCCTGA CGGCGAATGG
GGCGAACTGG TGCTGACCAC GCTGGTCAAG GAAGCTGTGC CCCTGCTGCG GTACCGCACC
GGCGACAAGG TCCGACGGGT GCCGGATACG TGCGGCTGCG GCTCCGTGTT CACCGCCCTG
GACCGTATTG CCGGACGCGT CGACGACGTC TTGACCGTCA AGGGAGTCAA TATCGCCCCG
GCACGCATTG GGCAGCTGCT GAGCACCTAT CTGGATTTCG ACATCCACTG GAACGCTACG
ATCGCCGGCT CCGGCCCGGA CCAGGAGCTG ATTCTGCGCC TGGGAATCCG TGAAGATCTC
TTTTTCGATC AGATGAAGCG CCAGCGCAAA CTCGTCGACG ACCTCCGCCG CTATCTCGCC
CAATGGCTGG GAGTCACGCC CCGGGTATTG CTCGTGGAGC CAGATAGCTT GAACTAG
 
Protein sequence
MAVLAATALP ASRDDLEQLQ LERLQATLHR VQRHVAFYRS MFADTGFDPD QCASLSDLQR 
LPLTNETDLC QAYPYDMFAT PLKEVVQIHT TTGRHPEPVV HGYTERDLTN AAMLMARIMT
GLGLDADDVF QITLNYGLGT GAFTFHEGAR KLGASVIPTA TGRTPKQVQI MRDFGTSCLV
ATPSYALRLL QTLKDQDVSP AALRLKCLLV TGEPFSADTR AVLEDGFQAQ IYDLYGLSAA
YGPVVAAQCR NQSVLHVQED LFYAEVLDPQ THQPVPDGEW GELVLTTLVK EAVPLLRYRT
GDKVRRVPDT CGCGSVFTAL DRIAGRVDDV LTVKGVNIAP ARIGQLLSTY LDFDIHWNAT
IAGSGPDQEL ILRLGIREDL FFDQMKRQRK LVDDLRRYLA QWLGVTPRVL LVEPDSLN