Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1095 |
Symbol | rpsR |
ID | 8418920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1285691 |
End bp | 1285951 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645037667 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_003197961 |
Protein GI | 258405219 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.443654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0284482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTTC GTAGAAAGTT CCGCCCCAGG AAAAAAGTTT GCCGTTTTTG TCAGGATAAC GAGCTGAATC TGGATTACAA GAACATCGAG TTGTTGCAGG ATTTTGTGAC TGCCCGGGGC AAGATCATCG CCCGCCGTAT CACCGGGACC TGCGCCAAGC ATCAGCGGCA ACTGACCCGC GAGATCAAAC GGGCGCGGCA GATGGCTCTT CTGTATTACA CCACCACCCA CAGCACCGAG GTCAAGAAAA AGACCATTTA G
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Protein sequence | MAFRRKFRPR KKVCRFCQDN ELNLDYKNIE LLQDFVTARG KIIARRITGT CAKHQRQLTR EIKRARQMAL LYYTTTHSTE VKKKTI
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