| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1093 |
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| Symbol | |
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| ID | 8418918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1284417 |
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| End bp | 1285160 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037665 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_003197959 |
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| Protein GI | 258405217 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.253807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.019092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTG TGACCCGGAT CTTGTTGCTG TGCCTTGCCG CGGTGGTCAT GACCGCCGGC
AGCCTCCAGG CCAAGACCTT GACCGTGGCC TGCGACACCA ACTTTATGCC CTTTGAATTC
AAAAAGGACG GCGAATATGT CGGTTTCGAT ATCGACATCT GGGACACCAT CGCCCAGGAC
CTGGGCCTGG ACTACAAACT CCAGCCCATG GATTTCAACG GTATCATCCC CGCCCTGCAA
ACCGGAAATG TCGACGCCGC CATCGCGGCC ATTACCATCA AGTCGACCCG GGAGGAAGTC
GTTGACTTCT CCCATCCCTA CTATGATGCT GGTTTGCGGG TCATCGTCTC GGCTGACAAC
AACAGCATCA AGGGGCTGTC CGACCTCGAC GACAAAATAG TGGCCACCAA GATCGGCACC
ACCAGCGCCG ACTACGCCCG GGAGAACATG GACGCCAAAG ACGTCAAACT CTTTCCGAAC
ATTGATGCCG CTTACATGGA ATTGCGCACA GGCGGCGCGG ATGCCGTGCT CTTCGACGCT
CCGGCCGTCA TGTATTACGC TAACACCGCC GGCAAAGGGG CGGTCAAGGT TGTGGGCCCC
CTGTATCAGG GGCAATCCTA CGGCATTGCA TTTCCCCAGG GCAGCGACCT GCGCGAGAAA
GTCAATATCG CCTTGCTGAA GATGATCGAA AGTGGCGAAT ATGCTGAAAT CTATGAAAAA
TGGTTCGGTT CCAAACCGCA ATAG
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| Protein sequence | MRIVTRILLL CLAAVVMTAG SLQAKTLTVA CDTNFMPFEF KKDGEYVGFD IDIWDTIAQD
LGLDYKLQPM DFNGIIPALQ TGNVDAAIAA ITIKSTREEV VDFSHPYYDA GLRVIVSADN
NSIKGLSDLD DKIVATKIGT TSADYARENM DAKDVKLFPN IDAAYMELRT GGADAVLFDA
PAVMYYANTA GKGAVKVVGP LYQGQSYGIA FPQGSDLREK VNIALLKMIE SGEYAEIYEK
WFGSKPQ
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