Gene Dret_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1058 
Symbol 
ID8418883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1249727 
End bp1250263 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content54% 
IMG OID645037630 
ProductRhodanese domain protein 
Protein accessionYP_003197924 
Protein GI258405182 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0279298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACC TGAAAACCCT GATGGTCCTC TTGCTCACCG GTTGTGTTCT TTTGGCCTTT 
GCCAACCCCG CTACTGCTCT GTTCGGAAGT AAATTCGAGG AAGAACTTGA GACCGAGAAG
GCAGCCGTCA AACTGGTCCG CGACACCAAA CGGGGTGGCT ACGAACTCGT GGACACCGCG
ACGCTCAAGC AATGGATTGA CAATGGCAAG GAGATGCTCA TTATCGACAC CATGCCCTTT
GAGGCAAGCT ACGCCAAACA GCACGTTCCC GGGGCCGAAC AATTTCTTTT CCCCAAAGGG
GATATGCCCC AGTGGGATAG CGAGCAAACC GCGGGCAAAA CCAAGCAAGA CTTCCAACAA
CTCCTTGGCC CGGATAAAGA CAAATTGATC GTCGTCTACT GCGGTTTCGT TAAATGCGCC
CGAAGCCACA GCGGTGCCAA TTGGGCAGTC AAATTGGGCT ACACCAATGT TTACCGCTAC
CCCGGGGGCA TTTTTGCCTG GAAAGGCGCG GACTTCCCCA TCGGGTCTGT GGAATAG
 
Protein sequence
MPNLKTLMVL LLTGCVLLAF ANPATALFGS KFEEELETEK AAVKLVRDTK RGGYELVDTA 
TLKQWIDNGK EMLIIDTMPF EASYAKQHVP GAEQFLFPKG DMPQWDSEQT AGKTKQDFQQ
LLGPDKDKLI VVYCGFVKCA RSHSGANWAV KLGYTNVYRY PGGIFAWKGA DFPIGSVE