Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1058 |
Symbol | |
ID | 8418883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1249727 |
End bp | 1250263 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645037630 |
Product | Rhodanese domain protein |
Protein accession | YP_003197924 |
Protein GI | 258405182 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0279298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACC TGAAAACCCT GATGGTCCTC TTGCTCACCG GTTGTGTTCT TTTGGCCTTT GCCAACCCCG CTACTGCTCT GTTCGGAAGT AAATTCGAGG AAGAACTTGA GACCGAGAAG GCAGCCGTCA AACTGGTCCG CGACACCAAA CGGGGTGGCT ACGAACTCGT GGACACCGCG ACGCTCAAGC AATGGATTGA CAATGGCAAG GAGATGCTCA TTATCGACAC CATGCCCTTT GAGGCAAGCT ACGCCAAACA GCACGTTCCC GGGGCCGAAC AATTTCTTTT CCCCAAAGGG GATATGCCCC AGTGGGATAG CGAGCAAACC GCGGGCAAAA CCAAGCAAGA CTTCCAACAA CTCCTTGGCC CGGATAAAGA CAAATTGATC GTCGTCTACT GCGGTTTCGT TAAATGCGCC CGAAGCCACA GCGGTGCCAA TTGGGCAGTC AAATTGGGCT ACACCAATGT TTACCGCTAC CCCGGGGGCA TTTTTGCCTG GAAAGGCGCG GACTTCCCCA TCGGGTCTGT GGAATAG
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Protein sequence | MPNLKTLMVL LLTGCVLLAF ANPATALFGS KFEEELETEK AAVKLVRDTK RGGYELVDTA TLKQWIDNGK EMLIIDTMPF EASYAKQHVP GAEQFLFPKG DMPQWDSEQT AGKTKQDFQQ LLGPDKDKLI VVYCGFVKCA RSHSGANWAV KLGYTNVYRY PGGIFAWKGA DFPIGSVE
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