Gene Dret_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1029 
Symbol 
ID8418852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1210910 
End bp1211569 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content53% 
IMG OID645037599 
Producthypothetical protein 
Protein accessionYP_003197895 
Protein GI258405153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.607448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGC TCTACAGTTT TGTCGCAGGC CCCTTGGCCT GGGCGGCTTG GATCATATTC 
CTCGTCGGGA TTGTCTACAA GATTTACCAC TACGTCAGCT TGGCCAAGCA ACGCGACGCC
ATGGTCTTCG CCCACATGAG CGGGTATTAC GGGCTGCGTT CCATTGGCAA ATGGATTGTC
CCTTATGTGG CCACGAATTG GCGCAAAAAC GCTGTATTAA CAGCAGTCAC CTTCCTGTTT
CACATCTGCT TGCTGCTGGC GCCGATTTTC CTTTTCGCCC ACATGCTGCT TTGGAAGGAA
GCCATTGGGC TCAGCTTTCC GACCCTTCCG GACACGGTTG CCGATGTCAT GACCCTGATC
GTGATCGGCT GCTGCATCTA TTTTCTGGTC CGCCGTCTCA CGGTGCCAGA AGTGAAGTAC
GTCACCCAGA TTTCCGACTG GTTGCTCTTG GCCGTTGTGG CCGCTCCGTT TGTAACCGGT
TTTCTGGCCT ACCACCAAGT CCTGAACTAC AATCTGTTCA TCATTCTCCA CATCATTGCT
GGAGAAATCA TGTTGGTCAC CATCCCCTTT ACCCGCTTGT TCCATATGAT TCTGGGGCTT
GTCTCCAGGG CCTATGCGGG TTCTGAATTT GGTGCTGTCC GTCACGCCAG GGATTGGTAA
 
Protein sequence
MNTLYSFVAG PLAWAAWIIF LVGIVYKIYH YVSLAKQRDA MVFAHMSGYY GLRSIGKWIV 
PYVATNWRKN AVLTAVTFLF HICLLLAPIF LFAHMLLWKE AIGLSFPTLP DTVADVMTLI
VIGCCIYFLV RRLTVPEVKY VTQISDWLLL AVVAAPFVTG FLAYHQVLNY NLFIILHIIA
GEIMLVTIPF TRLFHMILGL VSRAYAGSEF GAVRHARDW