| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1010 |
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| Symbol | |
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| ID | 8418833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1185938 |
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| End bp | 1188115 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037580 |
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| Product | pyruvate phosphate dikinase PEP/pyruvate- binding |
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| Protein accession | YP_003197876 |
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| Protein GI | 258405134 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0583662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGT CGATCCCGGG CGCGTCCTTC GAGACCGACC CAGTTGTCCT GAGCACAGAA
CTGCCACCGC ACCGCCTTGC CGAAGCCGGA GGCAAGGCCC GCGGTCTGCT GACCCTTTTG
CACAACTCCA TAGCCATCCC GCGAACCGCC TATCTCCCGG TTGGTGCCTA CCGCGCTTTT
GTGCAGGCGA GCGGACTGGA GCAGATGCTT TTTCGCCTCA CCCACGGACT GGACCTGGAG
ACCCGGCGCT GGGAAGAGAT CTGGGACGCT TCCCTGCGAA TTCGCAACGC CTTCGAACGC
ACCGCATTTC CACCTGAGCT TAAGCAGCGC CTGGGGCGGA CGATTGAGCA CATCTTTGCG
GACAAGCCGC TCGCCATCAG GTCCTGTGCA CCGGCCGAAG ACGGAGCCCA TTCGCATGCC
GGGTTGCATG AATCGTATAT CAATATCCGG GGCGAAACGG AGGTATTGGT GGCGTTACGG
CGGGTCTGGG CATCGTTATG GTCTGACCGG GCGCTCATGT ATCGCCGCGA ATTGGGGTTG
GATCCCGCCC ATGCCGGAAT GGGAGTCCTG ATGCAGGAAA TCGTTCCCAG CGACAAGTCC
GGAATCATTT TCACGCAAGG TCCACTTGAC GAAACCCAGA CCATTGTCGA GGCCGCTCCG
GGATTGCCGG GGGGAATCGT TGACAACGCC GTGGACACAG AGCGTTTCGT GGTCGACCGG
CGCACCGGAC GTGTGGAGGA ACACACCGCC TCGCAAGCGA CGCATAAACT TGTCCTCGGG
GAACAGGGAA CGGTTTTGGT CCCGCTTTCT GCTCCCGTCA AGGATATTTT GAATTCTGAA
GAACTCCAGC AGGTGCTGGA AATGGGTCGA CGGGCCGAGG GACTGTTCGG AACAGCCCAG
GACATGGAGT GGGCCTTCGC CAAAAAACGT CTTTTTGCCC TGCAGTCCCG CCCGATAACC
AGTCACGTTG AACCGAAAAC AGATGCCCTG TGGCAGGCCA CGGACAAGCG GCCATGGTAT
CTGAGTTTGA CCCGCAGTTT TGCAAACTTG CAAGCCCTGC GCGAGCGCAT CGAACACACC
ATCCTGCCAG AGATGAGTGC CGAAAGCGAA ACACTGCTCC AACGCGACCT GCCCGCACTA
TCCTGCGACG AACTGGACCG GGAAGTTCGC CACCGAAGGG CACGCCTTGA TCATTGGCAA
ACGGTCTACT GGCAGGACCT CATTCCCTTT GCCCACGGTA TCCGTTTGTT CGGCGTCCTC
TACAACGACA CGGTCCACCC GGAAGATCCG TTTGAATTCA CTCAACTCCT GGCAGGAGAA
GATCTCCTCG CCCTGGAGCG CAATGCTCTT TTAGACCATC TGGCTGAGAT GGTGGCCGAA
GACGATGACC TGCGCCACGA CCTGGAGGAT CATATCCTCC CGTCCACCGG TCCATTCGCC
CAGCAGCTTG AAACATTTAT TTCCCGCTTC GGAGACTTGG CCTGCAGCAC GACCTGGTGC
CAGGAGGGCC CCTGGGGAGT ACTGCGGATA GTCCTCGATC TGGCCTCCTC ACCCCACAGG
CACGCAACAA AGCGACACCA GCAAAGCGCC AACCTAGAAG AACAATTCTT CCAGGCCATT
TCAAGGGAGC GCCGGAAGTG GGCCGCTGAA GTGCTCGACC TGGCGCGCGC GAGTTATCGA
TTCCGGGACG ACGACAATCT CTATCTCGGC AAGATTCAGG CTCGGTATTA CGAAGTCCTG
GATGAAGCAA GAAAACGCCG CGATTTTGAG CTCTGTGCCT GGCCGCAGGA CATTGAAGAC
CTGCTTCAGG ACCCCAGTGC CCATCGCGCT GGCCCGGCCA CAGTGGCACG TTCCACTACG
GAAACACTTT CAGGGACCCC AGCCTCGGCC GGCATTGCCA GAGGGCCGGT ACGGGTCATT
CACTCCCCGG AGGATTTATA TAGTGTACAA TCCGGGGATG TGCTCGTCTG TGACGCCCTT
GATCCGAACA TGACCTTTAT CGTACCGCTG GTGGCCGCAA TTATCGAGCG CCGCGGCGGC
ATGCTCGTGC ACAGTGCGAT TATCGCCCGG GAATACGGCA TCCCCTGCAT TACCGGCGTC
GTTGCCGCTA CCTCCCGTAT TCCGGATGGG ACGGCGGTTG CTGTGGACGG GTTCAAGGGC
ACTGTGACCT TCCTCTGA
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| Protein sequence | MSQSIPGASF ETDPVVLSTE LPPHRLAEAG GKARGLLTLL HNSIAIPRTA YLPVGAYRAF
VQASGLEQML FRLTHGLDLE TRRWEEIWDA SLRIRNAFER TAFPPELKQR LGRTIEHIFA
DKPLAIRSCA PAEDGAHSHA GLHESYINIR GETEVLVALR RVWASLWSDR ALMYRRELGL
DPAHAGMGVL MQEIVPSDKS GIIFTQGPLD ETQTIVEAAP GLPGGIVDNA VDTERFVVDR
RTGRVEEHTA SQATHKLVLG EQGTVLVPLS APVKDILNSE ELQQVLEMGR RAEGLFGTAQ
DMEWAFAKKR LFALQSRPIT SHVEPKTDAL WQATDKRPWY LSLTRSFANL QALRERIEHT
ILPEMSAESE TLLQRDLPAL SCDELDREVR HRRARLDHWQ TVYWQDLIPF AHGIRLFGVL
YNDTVHPEDP FEFTQLLAGE DLLALERNAL LDHLAEMVAE DDDLRHDLED HILPSTGPFA
QQLETFISRF GDLACSTTWC QEGPWGVLRI VLDLASSPHR HATKRHQQSA NLEEQFFQAI
SRERRKWAAE VLDLARASYR FRDDDNLYLG KIQARYYEVL DEARKRRDFE LCAWPQDIED
LLQDPSAHRA GPATVARSTT ETLSGTPASA GIARGPVRVI HSPEDLYSVQ SGDVLVCDAL
DPNMTFIVPL VAAIIERRGG MLVHSAIIAR EYGIPCITGV VAATSRIPDG TAVAVDGFKG
TVTFL
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