| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1006 |
|---|
| Symbol | |
|---|
| ID | 8418828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1179686 |
|---|
| End bp | 1180156 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645037575 |
|---|
| Product | protein of unknown function UPF0153 |
|---|
| Protein accession | YP_003197872 |
|---|
| Protein GI | 258405130 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0727] Predicted Fe-S-cluster oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0180837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCACT TGGTTGAAGC ATTTGTTTGT CAGATGTGCG GCAGCTGCTG CCACGGCGAA
GGCGGTATCG TGGTCGATGG CGACGACCTG GTTCGCCTCG CCGCCCATCT TGGAATCGCA
CCGGCACGAT GTGCCGAACT CTATACCCGG GCCAAAGGGG AAAAACGCGT TTTGACCTCT
TCAGCCGAAG GCGCCTGCGT CTTTTTTCGC GAAGGCCAGG GGTGTTCTGT CCATGTGGCC
AAACCCTCTA TTTGCCGAGC GTGGCCGTTT TTCCGGGGCA ATCTGCTCGA TCCCCTGAGT
TGGGAACTCG CTCAAGAAGC GTGCCCGGGC ATTAACGCCG AGGCCGGCCA TGCCGAATTC
GTCCGCCAGG GCTGGACGTA TCTCCAGCAA AACGGCCTGC TCAAGCCCCG GCGGGACGAC
ACCGCTAACG CCCTGGTCAT CGCGGCTCAA GACCTCCCCT ATTCGCTCTG A
|
|---|
| Protein sequence | MSHLVEAFVC QMCGSCCHGE GGIVVDGDDL VRLAAHLGIA PARCAELYTR AKGEKRVLTS
SAEGACVFFR EGQGCSVHVA KPSICRAWPF FRGNLLDPLS WELAQEACPG INAEAGHAEF
VRQGWTYLQQ NGLLKPRRDD TANALVIAAQ DLPYSL
|
|---|
| |