Gene Dret_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1004 
Symbol 
ID8418826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1178729 
End bp1179112 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content56% 
IMG OID645037573 
Producthypothetical protein 
Protein accessionYP_003197870 
Protein GI258405128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00939933 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGCAAC GGTCTGATCA GGAAACCGGT AGCTGCCCGG GGGCCGCGGC CCCCGGGCAG 
CAGCAAAAAA ACCAAAAGCC TCAGCGTATC TCCGCCAAAA TGAAGACCAG GGTCGTACAA
CGGGTAATGC GAGGTGAAAG CCTGGAGCTT TTGGCCCGAG AATTCGGCAC CTCTGTCGCC
AAGGTCTCGC AGTGGCGAGA TGAATTTATC CAGGCTGGCG AAGAGGCTAT GAAAAAAGAT
CGCGGTTCGG ATGAAAAAGA CCGCAAAATC GCAAACTTGG AGCAGAAGCT GGGTGAAACC
ACCATGGACT ACGAGCTTCT GCAGGACAAG GTCAGGCGCC TGGAGCAAAA GCGCCCTTTG
GCCCGGAGGA AGTCGAAGAA ATGA
 
Protein sequence
MSQRSDQETG SCPGAAAPGQ QQKNQKPQRI SAKMKTRVVQ RVMRGESLEL LAREFGTSVA 
KVSQWRDEFI QAGEEAMKKD RGSDEKDRKI ANLEQKLGET TMDYELLQDK VRRLEQKRPL
ARRKSKK