| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1001 |
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| Symbol | |
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| ID | 8418823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1174962 |
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| End bp | 1176134 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037570 |
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| Product | SufBD protein |
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| Protein accession | YP_003197867 |
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| Protein GI | 258405125 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.36259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0114053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGAG ACGACAGAGA ACAAGTCGAT ATCAATACAT ATACGTTTGA GGGACCGGAT
ACCGGGGGAA TCACCGATCT TCGGCATATG AGCGATGAGG ACAAGCAGCA GCTGTTGATG
TCTGGTGTCG ATGTTTCAGA GGAAGGGCGT AGCGGCACCT ATCTCCATGT CAACCAATCC
CAGGTCCACT GCTCCTCGTG CCAACCCGGC GTGGAGGTCC TGGATATCAA GCAGGCCCTT
GAAAAATACG ACGGCTTGCC CGACTACTAT TTTCAGGCCG TGGACAAGAA CAAGGACGAA
TACACGCAGG CCGTGGCTGA GAAATTGCAC GGCGGTTATT TTATCCGGAC CGAGAAAGGG
GCTAAAATCC TTGATCCGGT GCAGTCCTGT CTGTTTATCA AAGGTGAGAA TGTCGGGCAG
AATGTCCACA ACATTATCGT CGTTGAAGAG GACTCCGAAC TGCATATCAT CACCGGATGC
GCTGTTTCCC ACGGGGTGCA GAATGCATTG CACCTGGGCG TCTCCGAGTT CTATGTCAAG
AAAGGCGGGA AACTGACCTT TACCATGGTC CATAACTGGG GCGAACAGGT GAAGGTGCGG
CCGCGTACGG TGGGCATTGT CGAGGAAGAC GGGGTATTCA TGAATAATTA TGTACTCATG
AAGCCTGTCT ATTCCGTGCA GTCCTATCCG ACAGTTTACC TTAATGGGGA AAACGGTGTA
GCGACCTTCA ACTCGGTTCT TGTGGCGCCT CCGGGGTCGT ATATCAACAG CGGCAGCCGG
ATCGTTCTCA ATGCTCCGCA TACCCGCGGG GAGATCATTT CCCGGACCAT TACCACCGGC
GGGACGATTG TTGCTCCGGG GCACATCGTC GGCAATGCCG TTCCGGCCCG TGGCCATTTG
GAATGCAAGG GGCTGATTCT CGAAGACGGT GTCATTCACG CTATCCCGGA ACTCGAAGGG
TCGGTCACTG GCGTGGAACT CTCCCACGAA GCTGCGGTCG GCAAGATCGC CCAGGAGGAG
ATCGAATACC TCATGGCCCG CGGCCTTGAT GAAGACGAGG CCACATCGAC CATTGTCCGG
GGCTTTTTGA ACATGGACGT CTCCGGACTG CCGGATGAGC TGCAACAGAT GATCGAAAAG
ACGATCGAGG AAAGCGGTGA AGAAATGTTT TAA
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| Protein sequence | MRRDDREQVD INTYTFEGPD TGGITDLRHM SDEDKQQLLM SGVDVSEEGR SGTYLHVNQS
QVHCSSCQPG VEVLDIKQAL EKYDGLPDYY FQAVDKNKDE YTQAVAEKLH GGYFIRTEKG
AKILDPVQSC LFIKGENVGQ NVHNIIVVEE DSELHIITGC AVSHGVQNAL HLGVSEFYVK
KGGKLTFTMV HNWGEQVKVR PRTVGIVEED GVFMNNYVLM KPVYSVQSYP TVYLNGENGV
ATFNSVLVAP PGSYINSGSR IVLNAPHTRG EIISRTITTG GTIVAPGHIV GNAVPARGHL
ECKGLILEDG VIHAIPELEG SVTGVELSHE AAVGKIAQEE IEYLMARGLD EDEATSTIVR
GFLNMDVSGL PDELQQMIEK TIEESGEEMF
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