| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0962 |
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| Symbol | |
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| ID | 8418782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1135314 |
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| End bp | 1136429 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037529 |
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| Product | integrase family protein |
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| Protein accession | YP_003197828 |
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| Protein GI | 258405086 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000586623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000358592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGAGCA AGAAAAAACG GAACGGAAAG ATGGTCGGGT GGTTAGCGCA AGTACGGCGC
CAAGGTGTGA ACAAAAGCCG AGTCTGCGCA ACACGGGAAG AAGCGTTGGC ACTCGAGGCG
CAGTGGAAGG CCGAGATCAA AATCGAGGAA GAACGGACAA CCCCCACGGT CTTGGAATGG
GGTAACGATT ACCTCGATTT TTCGAAAAAG CGTCACAGCG AGCGCACCTA CGAGGAAAAG
CGGTATGCGT TGGATTTATT GGTCCGAGCT GTTGGCGGCG AGACAGAAGT CCGGCATATA
ACCGTGGGCA ATGCCCTGGC TATCCTGGAC GATGTGGCTG AACGGCGGAG TGGGTATGTG
GCCAACCAAG TGCGCAAAAA TCTGCTTGCG GCGTGGAACT GGGGCAACCG CTATCTGGAC
AAGTGGCCGG ACATGGCGTC GCCATTTGGC AAGGTGGAGC GCTACAGCTA CCAGAAGCGA
CCGCGCGTCG TGCCACCCAT GGAGGATGTC CAGGCGGTGT TGGAAATCAT GGATGAAACC
GACCGGGCCA TGCTGCTCGC CTACCTCCAT ACGGCTGCGC GCCGGGATGA GATTTTCCGG
TTGCAATGGG AAGACATCGA TTTTGCAAAT TCCAAAATCG CCCTCTGGAC ACGGAAACGT
CAGGGTGGAG CGTGGGAAGC GGATCGAATC CCCATGACCC GGGATCTGCG CGAGGCCTTG
CTCAAAGAGC GGGGCAAAGG CAACGGCCAT GGGCTTGTGT TTTGCCGCGA AGGCGGCCGC
AAGTACCAAT ACCGGCGGCA TTGGATTCCC TATTGGTGTG ACCGGGCTGG GGTGCCCTTG
TTCAGCTTCC ACGGGATACG GCATCTGGCT GCAAGCTGGC TCGATGCTCA CAATGTGCCG
CTGACCACGA TCCAGGCGGT CCTGCGGCAC AAGTCAGCGA ACACCACGGC CAAATACCTG
CATGAACTGC GTGGCGTGCA GGCGGATCTG GATAATGTGT TCAGCGGCCA AAAAGCCAAG
GTCACGGAAT CGAGTAGGAG GGGGCCTTGC GGCCCCCGTC CTCTCACACC ACCGGGCATA
CGGTTCCGTA CCACGGCGGT TCACCTGACA CTTTGA
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| Protein sequence | MPSKKKRNGK MVGWLAQVRR QGVNKSRVCA TREEALALEA QWKAEIKIEE ERTTPTVLEW
GNDYLDFSKK RHSERTYEEK RYALDLLVRA VGGETEVRHI TVGNALAILD DVAERRSGYV
ANQVRKNLLA AWNWGNRYLD KWPDMASPFG KVERYSYQKR PRVVPPMEDV QAVLEIMDET
DRAMLLAYLH TAARRDEIFR LQWEDIDFAN SKIALWTRKR QGGAWEADRI PMTRDLREAL
LKERGKGNGH GLVFCREGGR KYQYRRHWIP YWCDRAGVPL FSFHGIRHLA ASWLDAHNVP
LTTIQAVLRH KSANTTAKYL HELRGVQADL DNVFSGQKAK VTESSRRGPC GPRPLTPPGI
RFRTTAVHLT L
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