Gene Dret_0932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0932 
Symbol 
ID8418752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1103610 
End bp1104107 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content37% 
IMG OID645037502 
ProductCheW protein 
Protein accessionYP_003197801 
Protein GI258405059 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0978481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAT CAGTCAATAC AGATAAAACC GCTGCAACCG GATGTGCTGG AAAATATTTG 
ACTTTTTTTC TAGCCGATGA AGTGTATGGA GTCCCTATCC TTAAAGTTCA AGAAATAATT
GGCCTTAAGG AACTCACGAA GGTTCCGAAA GTTCCTCAAT ATATAAAAGG GGTTTTGAAT
CTAAGAGGGA AGGTCATCCC AGTTGTAGAT CTTCGCTTAA AATTTGATAT CGAGGAAAAA
GAAGATACAC GAAGTACGAG CATTATAATC TTTCAAGTTC AGAAAAATGG CTCAGATGTT
ATTGCTGGTG TAAAAGTTGA TTCTGTTAAT GAGGTTGTAG ACATCAAAGA AAGTGATATA
GAGCCAACCC CAGCTCTCGG AATGCAAGAA GCAGAAGAAC TTGTCATAGG TATGGCTAAG
ATTCATAGCA CTGTTCATAT GTTGATTGAT ATGGATCGCA TACTTAATAC TGATGCAATT
TTAAATATAG CCGAATAA
 
Protein sequence
MQKSVNTDKT AATGCAGKYL TFFLADEVYG VPILKVQEII GLKELTKVPK VPQYIKGVLN 
LRGKVIPVVD LRLKFDIEEK EDTRSTSIII FQVQKNGSDV IAGVKVDSVN EVVDIKESDI
EPTPALGMQE AEELVIGMAK IHSTVHMLID MDRILNTDAI LNIAE