| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0839 |
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| Symbol | |
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| ID | 8418658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 995916 |
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| End bp | 996869 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037408 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_003197708 |
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| Protein GI | 258404966 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00175463 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.714962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGCC ACGGTGAACT CAAGATTTTG ACCGGCTCGG CAAACCCGAA GCTGGCCGAA
GCGATATGTG AACACCTCGG ATGCAATCTC ACTCCTGCCA TAGTGGGCAC GTTTAGCGAC
GGGGAAATCC GGGTTGAAGT TGGGGCCAAC GTTCGTGGTG ACGATGTTTT TGTCGTTCAA
CCCACCTGCC ATCCGGTCAA TCACAATCTC ATGGAATTGT GCCTGATTCT GGATGCCTTG
AAACGTGCCA GCGCCAATCG CGTCACGGCT GTAGTGCCCT ACTACGGCTA CGCCCGCCAG
GACCGGAAGG TCGTTCCCCG CGTTCCGATC AGTGCCAAGA TGGTCGCCGA CTTTATCTCG
GTGGCTGGCG CTCACAGGCT GCTCACCGTT GACCTGCATG CCGGGCAAAT CCAAGGTTTC
TTTGACGTCC CTGTCGATAA TCTCTACGCC GCTCAGGTTG TTCTGGAATA CGTCAAGTCC
ATCGGCTCTC CAGAAGATCT GGTCATTGTT TCTCCCGATG CCGGAGGGAC GGAGCGGGCC
CGTGCCTATG CCAAGCGGTT GGGGGCAAGC CTGGCGATCA TCGACAAGCG TCGCGACGCG
CCCAATCAGG CGCAAGCGAT GCGAGTCATC GGGGATGTCC AGGATAAAAT CGCTGTGGTC
CTTGACGATA TGGTCGATAC CGCCGGCACC ATGGTCGCCG GGGCCGAGGT GCTAGCCCAA
AAAGGGGCTC GCGAGATTTA CGCCTGTGCA ACCCATCCGC TCTTATCTGG GCCGGCCATC
GAGCGCTTGT CGCAGTCGGC CTTTTCAAAA ATTCTTGTCA CGGACACTGT CCCCTTGCGC
CCAGAAGCCC AGGCCTGCGA AAAGATAGAA GTCATCTCCG TGGCCAGCCT TTTGGCCAAG
GCCATTCACA ATATCCATAC TGAATCGTCT GTCAGTGTTC TTTTTACTCC GTAA
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| Protein sequence | MSGHGELKIL TGSANPKLAE AICEHLGCNL TPAIVGTFSD GEIRVEVGAN VRGDDVFVVQ
PTCHPVNHNL MELCLILDAL KRASANRVTA VVPYYGYARQ DRKVVPRVPI SAKMVADFIS
VAGAHRLLTV DLHAGQIQGF FDVPVDNLYA AQVVLEYVKS IGSPEDLVIV SPDAGGTERA
RAYAKRLGAS LAIIDKRRDA PNQAQAMRVI GDVQDKIAVV LDDMVDTAGT MVAGAEVLAQ
KGAREIYACA THPLLSGPAI ERLSQSAFSK ILVTDTVPLR PEAQACEKIE VISVASLLAK
AIHNIHTESS VSVLFTP
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