| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0837 |
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| Symbol | |
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| ID | 8418655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 993291 |
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| End bp | 994721 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037405 |
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| Product | protease Do |
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| Protein accession | YP_003197706 |
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| Protein GI | 258404964 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.134567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.708087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAA TTGCTTCGAC AATCGTGTGC GGGCTGGCCC TGCTGGTGTT AAGCGGCAGT
ACGGCCCTGG CTCAACTCCC GGAATTCACC GAATTGGCCA AGTCGGCCGG CAAGGCTGTG
GTCAATATCA GTACGGTCAA AACAGTCGAC CAATCCCAGG GGGTCGAGGA GTTTTTTAAT
CGTTTCCACC GTCGTGGTGG CCCTTTTGAG GATTTTTTCG ATCAATTTGA ACGCTTCTTT
GGGCCCCAGC AGATGCCCAA ACGCCAGCAG CGGTCGCTGG GCTCGGGGTT TATCATGTCC
CGGGACGGCT ATATCGTGAC CAACAACCAT GTTGTTGAGC AGGCGGACAA AATCACCGTC
AATCTTCAGG GAGGGGAGAC CTCCTACCAG GCCGATATTG TTGGTCGGGA TCCTGAAACC
GATCTGGCGC TTTTAAAGAT CGAGGTCGAT CGCGAGTTGC CAGTTCTCGA ATTCGGAGAT
TCCGGAGAGA TGGAAATCGG TGACTGGGTT ATGGCCATCG GCAATCCTTT TGGCCTCGAC
CACAGCGTGA CCGCAGGCAT CATCAGCGCC AAAGGACGAG TCATCGGTGC CGGTCCGTAT
GATGATTTCT TGCAGACTGA TGCTTCGATC AACCCCGGCA ATAGCGGCGG CCCGCTCCTG
AACACCGACG GTAAGGTCAT CGGCATCAAT ACCGCGATCA TTGCCAGCGG CCAGGGCATC
GGCTTTGCCA TACCGTCTGA TATGGCCAAA CAGGTTATTG CGCAACTCAA GAAATACCAG
AAGGTCAAGC GTGGTTGGTT GGGTGTGACC ATCCAGGACG TGGACGAAAA CATGGCCAAA
GCTCTTGGTC TTGACGCGCC CAAAGGCGCC CTGATTGCTG GCGTCCGGGC CGGTGATCCG
GCCGATGAGG CAGGTCTTAA GGCAGGTGAC GTGGTCGTCT CCCTCAATGG CGAGCCGGTG
GAGGATGCCG ACGGATTGAC TCGTCGTATC GGGCGCATGG AGCCAGATAC AAAAGCGAAT
ATGACGATCT GGCGCCAGGG AAAGGTCAAG AAAATCGCCG TCGTGCTTGG CGAGCGGGAC
ACCGCCCAGG AAGAAGCTCG AGCCGAGCAA CCCGATTCTG AGCAAACCAG CGGCAGACTC
GGCATCGTCG TCCGGCCGGT TCGCGATGAA GAGGCCCGAG CCCTGGGCAT GGATGAAGCC
AGGGGGCTTT TGATCCAGGA TGTCGAACAG GCTTCCCTCG CCGCAGAGGC TGGGTTGCGC
CCCGGAGACG TCATCCTGGC TGCTAATGGG CAAGAGGTAG AAACCGTTCG GGGATTGTCG
CAGATCCTGA ATGAAGACGC CGCTGAGAAA GGGGCTGTTC TTTTCCTCGT CAATCGCAAG
GGACAGAACC TTTTTGTAAG CATTCCCCTG ACTGACGGGG ATGGCCAATA A
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| Protein sequence | MRKIASTIVC GLALLVLSGS TALAQLPEFT ELAKSAGKAV VNISTVKTVD QSQGVEEFFN
RFHRRGGPFE DFFDQFERFF GPQQMPKRQQ RSLGSGFIMS RDGYIVTNNH VVEQADKITV
NLQGGETSYQ ADIVGRDPET DLALLKIEVD RELPVLEFGD SGEMEIGDWV MAIGNPFGLD
HSVTAGIISA KGRVIGAGPY DDFLQTDASI NPGNSGGPLL NTDGKVIGIN TAIIASGQGI
GFAIPSDMAK QVIAQLKKYQ KVKRGWLGVT IQDVDENMAK ALGLDAPKGA LIAGVRAGDP
ADEAGLKAGD VVVSLNGEPV EDADGLTRRI GRMEPDTKAN MTIWRQGKVK KIAVVLGERD
TAQEEARAEQ PDSEQTSGRL GIVVRPVRDE EARALGMDEA RGLLIQDVEQ ASLAAEAGLR
PGDVILAANG QEVETVRGLS QILNEDAAEK GAVLFLVNRK GQNLFVSIPL TDGDGQ
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