| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0836 |
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| Symbol | |
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| ID | 8418654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 991904 |
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| End bp | 992995 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037404 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003197705 |
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| Protein GI | 258404963 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0935853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.864756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCA TATTTCTGCA CGCCCTGTGG GCGCTATTCC TTGTCGGCAT CGCCGTGTCC
GGAAGCCCCG CTCCGGCAAC TGCCCAGCAA GACCGTCCCC CCGCGCCCGT GGTCACCGCC
CCGGCGAGCG AAGGCTTGAT CGCCCCGACA ACCGAATACA TAGGCAGCCT GGACTACGCG
CAGTTGGCTG ATGTTTCCGG AGAGATCAGC GGACTGGTGG CCAGCGTCCA TTTTGAAGCT
GGCGACGCCG TCCAGTCAGG AGACACCCTG GTCCAATTGG AGTCGACCCT CCTTGAAGGC
TCTATCCGGG AACAACGCGC CGCCCTCGCC CAGAGTGAAG TGCAATTGGA ACAGTCCAAA
CTGCGACTGC AGCGCATTCA CAACCTCTAC AAGCGCGAGA CAGTATCCGA ACAGGAATAC
GACGATGCCC GCCTGACGAC TCGCGCCCTG GAGCAACAGG TCGCGGGGCA CAAGGCCAAA
CTGGCCCGGC TGCACGATGA ACTCCAGAAA AAACGGATCA CTGCCCCTTT CACGGGCATC
ATCCTGGAAA AACATCTCAG TCAAGGCGAA TGGTTTGCGC CTGGACAACC AGTGGCAACC
CTTGCTGGTC AAAACAAAAT GGATGCCGTG TTTCCTGTTG ACCAGCAGGT GCTGCCCTTC
ATCCACACCG GCCAGGCTCT TTCCCTGACC ACCGCTGAAA CCACTTATCA AGCCCGTATA
CAGGCCGTTA TCCGCCAGGG CGATGCTGTC AGCCGCACGG TCCCGGTCAA ACTCCGTTTC
ACTTCCGACG CGCGTCTGGC GGCAGGAATA GAGGCCCGGG CCGCTTTCCC CACCGGCCAT
GAGGCCAAGG GATTTCTGGT GCCGCGGGAA GCCGTCCTGG AAAAAGAGGG GCGTTCAGTC
CTCTATATTG TGCGCGAGCA GAAGGTGTTT CCCATTGAAG TGGCCATCAT CGGGTACCGC
GACGACGCAA TTGGCGTGCA GTCGGACAAA CTCCAGACCG GTGCCGAGGT GGTGATCAAA
GGCAACGAAC GTTTGCAACC AGGGCAAAGT GTCCGTCCCT CTTCCCGGCA GACTCCCGCC
ACCGAAAAAT AA
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| Protein sequence | MRRIFLHALW ALFLVGIAVS GSPAPATAQQ DRPPAPVVTA PASEGLIAPT TEYIGSLDYA
QLADVSGEIS GLVASVHFEA GDAVQSGDTL VQLESTLLEG SIREQRAALA QSEVQLEQSK
LRLQRIHNLY KRETVSEQEY DDARLTTRAL EQQVAGHKAK LARLHDELQK KRITAPFTGI
ILEKHLSQGE WFAPGQPVAT LAGQNKMDAV FPVDQQVLPF IHTGQALSLT TAETTYQARI
QAVIRQGDAV SRTVPVKLRF TSDARLAAGI EARAAFPTGH EAKGFLVPRE AVLEKEGRSV
LYIVREQKVF PIEVAIIGYR DDAIGVQSDK LQTGAEVVIK GNERLQPGQS VRPSSRQTPA
TEK
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