| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0811 |
|---|
| Symbol | |
|---|
| ID | 8418629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 959449 |
|---|
| End bp | 960444 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645037379 |
|---|
| Product | glycosyl transferase family 9 |
|---|
| Protein accession | YP_003197680 |
|---|
| Protein GI | 258404938 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.513636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCCTTT TTTCCTCCTC TGCAACCGGG CACGCAGAGG TGCCCGGCGG CTCCAAAAAA
ACGCGAACCC ATCCGGTGCG GAGCATGCCC TCTTTCGATA GAATCCTGGT TGTCCACAAC
GGCGCCCTCG GGGATTTCAT CCAGGTCTGG CCCTCTCTCC TGGCGTTGAG CCGCTTCTGG
GCCCCGACCC CAATTTTCTG GGCCGGCCGA CCGGCTTACC AGCATTGGGC CGAAAAGCTC
ATGCCCCAGG CCTCTGCTGA AGACCAAGCC GCCGTGCGCA CTTTATACAG CGCCACCCAA
TGGCCCGACC AATTGCAGAA CACCCTGGTC GTCTGGTTCG GCTTGCTGCA TATCCCGGTT
TCTTGTGTCC ATCCACAACT CTGGCCCATC ACCGGTTTGT CCGAAAATGA CCTGACACCA
CCGCGCCAAA GATACGCTCA GGCTCTGGAA CAGCGCGGCA TTCCCCAAGC GCAGGACTGG
CAGTCCGTTT GGTGCTCTCA GCCCCCCTCT CCCTGCCCCC AAACAGATCG TCGGGTCCTT
ATCGCGCCTG GGGCCGGCAA TGACCGCAAA TGCTGGCCGC TGCCGCGATT CATGGCTGTG
GCCCGCTGGC TGGCCAGAAA TGGGAAAAAG CCGGTCTTTC TCCTCGGCCC TGCCGAACTT
GAGCGGGGGG TTGATGTACA AAACTTTGAA CTCACCGCTC CCAGCCACCT GTCCGAACTG
CAGCAGCACC TCGCGCACGC TGAATTGGTG CTGAGCAATG ACGCCGGACC TATGCACCTT
GCAGCTGCCT GGCAGACACC AACGCTGAGC ATTTTCGGTC CGAGTTCGGC CCGCCAATGG
GCGCCGCCAG AGACGGTCAC CATCGCCTCC GCCCGGCCTT GCCGTCCGTG TACCCGAGAC
GGACGTATCG CTTGCTCTGA CCTGTCCTGT CTTTACGACA TTCCCGTCAG CCGGGTGGTC
AACCGCCTCA AAACCATGCT GACTCCATCC CTTTGA
|
|---|
| Protein sequence | MGLFSSSATG HAEVPGGSKK TRTHPVRSMP SFDRILVVHN GALGDFIQVW PSLLALSRFW
APTPIFWAGR PAYQHWAEKL MPQASAEDQA AVRTLYSATQ WPDQLQNTLV VWFGLLHIPV
SCVHPQLWPI TGLSENDLTP PRQRYAQALE QRGIPQAQDW QSVWCSQPPS PCPQTDRRVL
IAPGAGNDRK CWPLPRFMAV ARWLARNGKK PVFLLGPAEL ERGVDVQNFE LTAPSHLSEL
QQHLAHAELV LSNDAGPMHL AAAWQTPTLS IFGPSSARQW APPETVTIAS ARPCRPCTRD
GRIACSDLSC LYDIPVSRVV NRLKTMLTPS L
|
|---|
| |