Gene Dret_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0808 
Symbol 
ID8418626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp956753 
End bp957403 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content61% 
IMG OID645037376 
Productprotein of unknown function DUF374 
Protein accessionYP_003197677 
Protein GI258404935 
COG category[S] Function unknown 
COG ID[COG2121] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.887209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.845071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA CCTGGGCCCT TCAGGGCTCT ATCTGGGTGT TGCGCGGGGT AGTGCCCCTG 
TGGTGCAAAG CTTTGCGCTA TTCCCGCTCC AATTATGAGC CGGTCGCTGC GGTGCGGGCA
ACATCCCAGC CGGTGGTTTT CGCGATTTGG CACGATGAAT TGTTTCCGTT GTGCACCTTG
CATCGCGGAG AAGGGGTCGT GGCGGTCGTC AGTCAGAGCC GTGACGGCGA AATTTTGGCC
AAGGTGCTGC AAGCCTTCGG GTATGGGCTG GCGAGGGGAT CGACCAGTCG CGGCGGTCTC
AGGGCCCTGG TTGGGGCGTG TCGCGAAATC CAGAAAAAAG GCCGGGATGC GGTTTTGACC
GTTGACGGTC CCCGGGGGCC CCGCCATGTC GCCAAGCCGG GAGCGATTTA TCTGGCGGCT
CGAACCGGGG CCCTGCTTGT CCCGACCCGG GTGGCCATGT CCCGGGTCAA GCGATTCGAG
AAGGCCTGGG ACAAATTCCA ACTCCCATTG CCAGGGAGTA AGTGTCTGGT GCGGTATGGA
ACACCTTATG GCGTAGACCC AGGGGTGCTG CACTCTTCGA CCGGGATGGA AAAGGCCCGG
GAAACGTTAC AAAACGCACT GGAAACACTC GCAGGCAGCG AACATGTATA A
 
Protein sequence
MAKTWALQGS IWVLRGVVPL WCKALRYSRS NYEPVAAVRA TSQPVVFAIW HDELFPLCTL 
HRGEGVVAVV SQSRDGEILA KVLQAFGYGL ARGSTSRGGL RALVGACREI QKKGRDAVLT
VDGPRGPRHV AKPGAIYLAA RTGALLVPTR VAMSRVKRFE KAWDKFQLPL PGSKCLVRYG
TPYGVDPGVL HSSTGMEKAR ETLQNALETL AGSEHV