Gene Dret_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0720 
Symbol 
ID8418533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp854154 
End bp854516 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content48% 
IMG OID645037284 
Productheat shock protein Hsp20 
Protein accessionYP_003197590 
Protein GI258404848 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00436062 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.512737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA CAAACGTTCA GGAAAAAGAA TTGCCCCGGT ATCGTCCGGC GACAGATATT 
ATTGAAAAAG AGGATGGATT CCATCTTCTG GTCGACATGC CGGGGGTCAG TAAAGAACAG
CTGACCATTG ATCTCAATGA CAATACCCTG CGGGTATCAG GGAAATCGGA GTCACTCCTC
GCATCCCAGG AGCGCAATCT GGATCAGGAG TTTGCTACGG CTGAATATGT CCGGAGTTTC
ACCTTGTCCG ATGTCATCGA TCAAAACGGT ATCCAAGCCA ACCTCAATAA CGGCGTCTTG
GATATCCATC TGCCGAAGGT GCAAAAGTCG GAACCGAAAA AGATCGAGAT CCAAAGCGCA
TAA
 
Protein sequence
MSDTNVQEKE LPRYRPATDI IEKEDGFHLL VDMPGVSKEQ LTIDLNDNTL RVSGKSESLL 
ASQERNLDQE FATAEYVRSF TLSDVIDQNG IQANLNNGVL DIHLPKVQKS EPKKIEIQSA