| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0716 |
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| Symbol | |
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| ID | 8418529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 850833 |
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| End bp | 852059 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645037280 |
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| Product | peptidase U32 |
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| Protein accession | YP_003197586 |
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| Protein GI | 258404844 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0755954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.409296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCGAG GAGGATTGCC GGAACTCCTC GCTCCGGCAG GGGATTGGGA ACGGCTTCGC
ACCGCCCTGG TGTACGGCGC CGACGCCGTC TATCTCGGTG GCAGCGGTCT GGATCTGCGC
GCGCAAAGCA AAGGATTCTC TCCGGGGGAA CTCCCCGCCG CTGTGGCTTT CGCCGCCAGA
CACAGCGCCA AGGTCTATTT TTGCTTGAAC ATCCTGGCCC GGCAACACCA TCTGTCCCAG
ATAGAAGCCA CCCTGGAGCA GCTGGCCGCC ACCCCGATAC ACGGCCTCAT CGTGGCCGAC
CCCGGCGTGA TCGCCCTGGC CCGGCGCCTG GCCCCGGGTA TCCCCTTGCA TCTGAGCACC
CAGGCCAATA CCTCGAACGC CGCCAGCATC GCCTTCTGGC GCGATTGCGG TGTCCAGCGG
GTCAACTTGG CGCGCGAACT CTCCGGCCCG GAAATGCGCC GCATCCGCAG GGAGGTGCCG
GACATGGAAT TGGAATCCTT TGTCCACGGC GCCCAGTGCA TGGCCATTTC CGGACGCTGC
CTGCTCAGCG ACCACCTCAA CGGGCGCTCC GCCAATCTGG GGGCCTGTAC CCACCCCTGT
CGTTTCGGCT ACCGGCGCCA CATTCTGGAG GAAGGAGTCC GTCAGGGCCA GCCGTGTTGG
GAGATTGAAC AGGACAGAGA TTTTACGCAC ATCCTGGCCG CCGAGGACCT GTGTCTGGTG
CCCTACCTGG CCTGGTTCGT CCACCAGGGG TGGCAGAGTC TCAAAATCGA AGGGCGAATC
AAGACCTGTT CCTATGTCGG CCAGGTCGTG GACGTCTACC GCACCGCTCT GGACGATATC
GCCGCCCGCC GTTTTCGGCG AGACACCTAC CTGCGGGAAT TGGAGCCAAG CGCCACCAGG
AATCTGGGAA CAGGATTTTT CCTGCCCCAT GCCCGCGGAC TGACACTTCG CGCCGCCCCC
AGCTACCGCA CCCCCATTGT GGCTCGTATC GAACGCGAAC TTGCGCCGGG AACCTGGGAA
ATCAGCGCCC GGCACCGCTT TGCCGTGACT GACGATATCG AAATCGTGGC TCCCGGGCTG
CAGCGCCCTT GCCTTGGCTC ATTCGGACTG GAAAAAGAGG ACGGAAACCG GATCGAGACC
ATCCACTCCG GGGTCCGCGG CCGACTGCGA AGCGACAATC CCGCCTTGCG CCCCGACCTG
CTGTTACGAG CCCGTCTGCA GGCCTAG
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| Protein sequence | MSRGGLPELL APAGDWERLR TALVYGADAV YLGGSGLDLR AQSKGFSPGE LPAAVAFAAR
HSAKVYFCLN ILARQHHLSQ IEATLEQLAA TPIHGLIVAD PGVIALARRL APGIPLHLST
QANTSNAASI AFWRDCGVQR VNLARELSGP EMRRIRREVP DMELESFVHG AQCMAISGRC
LLSDHLNGRS ANLGACTHPC RFGYRRHILE EGVRQGQPCW EIEQDRDFTH ILAAEDLCLV
PYLAWFVHQG WQSLKIEGRI KTCSYVGQVV DVYRTALDDI AARRFRRDTY LRELEPSATR
NLGTGFFLPH ARGLTLRAAP SYRTPIVARI ERELAPGTWE ISARHRFAVT DDIEIVAPGL
QRPCLGSFGL EKEDGNRIET IHSGVRGRLR SDNPALRPDL LLRARLQA
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