Gene Dret_0715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0715 
Symbol 
ID8418528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp849600 
End bp850772 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content63% 
IMG OID645037279 
Producthypothetical protein 
Protein accessionYP_003197585 
Protein GI258404843 
COG category[S] Function unknown 
COG ID[COG1641] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00299] conserved hypothetical protein TIGR00299 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.356802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.392817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAC TCTTTCTTCA ATGCCCGACG GGAATCAGTG GGGACATGTT TCTGGGCGGA 
TTGGCTGATC TGGGACTGGA CTTCACTCCC TTGGCGACCA TGTTCAGCCA GGCTGGTCTG
GATATTGAAC TGAGCACGCC GCAGGTGCGG CGACACGGAC TTGTGGGCAC TGGGTTGGAA
CTCGGCGCTG CGGCGGAGCA GCCCCTGCGC CATGAAAGTG ACCTGCGAGA GGTGATCCAT
TCGCTGCCCC TGTCCCGCGA AGTGCGCGAT AAGGCCTGCA GGGCCGTGGC TCGCCTCGCC
GAGGCCGAGG CCGCCGTTCA CGGTATCGAC CGCGAAGCGG TCCATTTTCA CGAGGTCGGC
GCCGTGGACA CGGTGGTCGA TATAGTTGGA GCGATGTGGG GTGTGGAGCA ACTCGGCATC
GAGCGCATCA CCTCGACGCC TCTGCCCTGG TCTCACGGGG AGGTCCATTG CGAACATGGC
ATCCTTCCGG TTCCGGCCCC GGCCACGGTC CAACTTCTTC GCGGCAAGCC GGTCGCTCCC
GCAACAGAAC ACGGAGAATT GGTCACACCG ACGGGAGCGG TTCTCGTCGA CCAGATGGTG
GATGAGTTTG TTGAGGGGCC GACCGGGACG CTTCTGGCCT CGGGACTGGG GTGGGGCAGC
CGGGAACTCC GGCAGCGCCC CAATGCGCTG CGTCTGTTTC TTGTAAAGAC CGGCAATACG
GCGCCGCGTC CGGAAGAGAT CTGGGTTCTG GAAGCCAATA TCGATCACCT GACCGGAGAG
GAACTCGGCG GACTTTTTGG TCGCTTTCTG GACGCCGGCG CACTGGATGT CGTGTATCTG
CCGGGGGTGA TGAAAAAAAA CAGGCCCGGC GGGGTGCTGC AGGTCTTGAG TTCTCCGGAG
GACCTCCCGC AGTTGCAGGA AATGTTCATT GCCCACAGTT TGACGCTGGG CGTGCGGCGC
AAAAAATGGG AGCGGCTGGT GGTCGAGCGG CAGGCCAGCC ATCTGCAGAC CCCGTGGGGG
ACAGTGGCGG CTAAGACTGC CTCCAGTGGA GCGCTTTCCT GGACCCGCCC GGAGTATGAG
GCGCTGGAGG CTCTGGCTGC CAAAACCGGT CGCTCCGTGG CCGAATTGCG TTTGAAACTG
GGGCTCAAGG CGCAAGAAGA TGACCCAGCG TAG
 
Protein sequence
MQELFLQCPT GISGDMFLGG LADLGLDFTP LATMFSQAGL DIELSTPQVR RHGLVGTGLE 
LGAAAEQPLR HESDLREVIH SLPLSREVRD KACRAVARLA EAEAAVHGID REAVHFHEVG
AVDTVVDIVG AMWGVEQLGI ERITSTPLPW SHGEVHCEHG ILPVPAPATV QLLRGKPVAP
ATEHGELVTP TGAVLVDQMV DEFVEGPTGT LLASGLGWGS RELRQRPNAL RLFLVKTGNT
APRPEEIWVL EANIDHLTGE ELGGLFGRFL DAGALDVVYL PGVMKKNRPG GVLQVLSSPE
DLPQLQEMFI AHSLTLGVRR KKWERLVVER QASHLQTPWG TVAAKTASSG ALSWTRPEYE
ALEALAAKTG RSVAELRLKL GLKAQEDDPA