| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0678 |
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| Symbol | |
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| ID | 8418491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 808792 |
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| End bp | 810381 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037242 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003197548 |
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| Protein GI | 258404806 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.828772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGT ATAAAGGGGC AGAGATCAAG GTCGGCATTT TTGTGTGCAT CGCGCTGGTG
GCCCTCGGCT ATATGTCCAT GCAGGTCGGA CAGGGCCTTT TCGTCGACAA GGACACCAAA
AAAGTCAGTG TTTTTTTTGA CAATGTTTCC GGCCTCAAGC AGGGAGCTCC AGTGGAAATC
GCCGGGATTG AAGTCGGGCA GGTCCATTCC ATCGGTCTGG CTGACGGCCG CGCCGAACTG
ACGCTGGCAC TGGACAAGGG CATTGCTGTT CCGGTGGACG TCAAGGCGGT CATCCGAACG
CGGGGCGTAC TCGGGGATAA ATTCGTCGAA TTGCGCGGCG GTTCGCCGGA GATGCCGAAT
CTGGAGGAAG GGCAACGGAT CACCCGTTCG TCGTCGCCCG CGGATCTGGA CCAGCTGCTG
CAGAAAGTGG GACAGATCGC TGAGGATATC AGCACCGTCA GTCAATCGGT GTCCAATGTG
TTCGGCGGTG AGCAGGGCGA GGCCCAATTG CAGACCATCA TGGACAACGT CCGGGAATTG
ACGGTGACCC TCAATGGTTT GGTCCAGCAG AATGCTGAAA GCGTCGAGCG CATTGTGGCC
AACCTGGACG GGTTTACCGC GGATATGCGG GAAATGACCG CCCGGAACAA GGACCAGATC
AACGATGCTG TTTCCGACCT GGGGGCGTTT GCCGCGAATA TGCGGGAGAT TACCGGAGAG
AATAAAGACG GCATCCAGCG TATTGTGACC AACCTCGACC GGGCCTCCGG CAAATTGCAG
ACCACGATGC AGGCCATGCA GGATGTGCTG GGCAAGGTGG ACGAGGGGCA AGGCACCTTG
GGCACGATGG TCAACGACGA AGAGATGGCC TACGACCTGA AAAAGACAAT GGCCTCCCTG
GAATCGGTTT CGCGCAAAAT CGACGAAGGA CGCGGGACCC TGGGCAAGCT GGTCAACGAC
GACACCACCG GCAAAGAACT GGACAAGGCC CTGGAAGGGG TGAACACCTT TTTGGCCAAG
CAGGAGCAGT TCAAGACTTC CGTGGACTTC ACCTCCGAAT ACCTCGCCGA CAGCGGAGAT
ATGAAATCCT ATCTCAATCT CAAGCTCCAG CCCACCGAGG ACAAGTATTA CCTGCTCTCC
CTGGTCGACG ATCCCAAGGG GCGCACGGAG ACGACCTCTT TGGTCAGGCG GTATAAGAAA
GATGGTGAAC CCTGGAAGAC CTATCGGGAA GAGGAGGAGG AAACCCAGGA GGACGGTCTG
AAATTTTCGG CCCAGATGGC CAAGCGGTGG AACGATTGGG TCCTGCGCGG CGGGATCATC
GAGTCGTCCG GTGGCCTCGG AGTCGACTAC TACCTCTGGG ACGACCGGAT CCGGCTCTTT
GCCGAGGCGT TCGACTTCGA CGACGAGAAT CCGCCGCACC TCAAAGCCGG GGGCAAGCTT
TACTTCCTGA ACAATTTCTA CATCAGTGCC GGCATGGACG ATTTTGCCAG TGACACGGGC
GATGAGTCCT TTTTTACCGG CCTTGGACTG CGATTTTCCG ACGACGATTT GAAATATATC
CTGGGCAAGA CGCCGCTGCC GCAGCAATAG
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| Protein sequence | MSVYKGAEIK VGIFVCIALV ALGYMSMQVG QGLFVDKDTK KVSVFFDNVS GLKQGAPVEI
AGIEVGQVHS IGLADGRAEL TLALDKGIAV PVDVKAVIRT RGVLGDKFVE LRGGSPEMPN
LEEGQRITRS SSPADLDQLL QKVGQIAEDI STVSQSVSNV FGGEQGEAQL QTIMDNVREL
TVTLNGLVQQ NAESVERIVA NLDGFTADMR EMTARNKDQI NDAVSDLGAF AANMREITGE
NKDGIQRIVT NLDRASGKLQ TTMQAMQDVL GKVDEGQGTL GTMVNDEEMA YDLKKTMASL
ESVSRKIDEG RGTLGKLVND DTTGKELDKA LEGVNTFLAK QEQFKTSVDF TSEYLADSGD
MKSYLNLKLQ PTEDKYYLLS LVDDPKGRTE TTSLVRRYKK DGEPWKTYRE EEEETQEDGL
KFSAQMAKRW NDWVLRGGII ESSGGLGVDY YLWDDRIRLF AEAFDFDDEN PPHLKAGGKL
YFLNNFYISA GMDDFASDTG DESFFTGLGL RFSDDDLKYI LGKTPLPQQ
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