Gene Dret_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0653 
Symbol 
ID8418465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp780941 
End bp781351 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content51% 
IMG OID645037216 
Productflagellar basal-body rod protein FlgB 
Protein accessionYP_003197523 
Protein GI258404781 
COG category[N] Cell motility 
COG ID[COG1815] Flagellar basal body protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.395926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATA ACGTTTTATT TGGATCGACG ATTGGCCTGT TGGAGCAGTC CCTGAACCTG 
CGAGCCCGAA ATCACGAGAT GTTGACGTCG AACATTGCCA ACGCGGAAAC TCCGGGGTAT
GCCTCGCAGC ACTTGCAATT TGAAGAGCAA TTGCGAGCCG CTTTTGACCC TGAGGCACAA
AAGATGGAAG CCACGCACGA GGATCATTTC GGATTTGTCG ATGACATCAA TCAGGTTGAT
GGGGAAGTGA TTTCGGATCC CGGCAAGGCC GTTTCCGACA ATGGGGTGCG TATGGAACAG
GAAATGGCCA GACTCTCGGA AAATCAGATC AAATATGAGA CGGCGGCGCG GATTTTGTCG
CGGAAATTCG CCTCCCTTGA ATATGTGATT CAGGAAGCAT CGAAATCCTA A
 
Protein sequence
MSDNVLFGST IGLLEQSLNL RARNHEMLTS NIANAETPGY ASQHLQFEEQ LRAAFDPEAQ 
KMEATHEDHF GFVDDINQVD GEVISDPGKA VSDNGVRMEQ EMARLSENQI KYETAARILS
RKFASLEYVI QEASKS