| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0638 |
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| Symbol | |
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| ID | 8418450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 763879 |
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| End bp | 765393 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037203 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003197510 |
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| Protein GI | 258404768 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.316321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0202803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCAGT ATCAGCATGT TTTGCACCGG ATGCGCTTGG GCGATTCTGA CCGGCAGATC
CAGAAAGCTG GGCTCATGGG GCGCCGCAAG GCGGCTACCG TCAGACAGAA GGCTCGAGAG
CAGGGTTGGC TTGACCCTGC GTGCCCCATT CCGCAAGAGG CGGACCTGCA AGCGACTTTT
GGCTCCCAAT CCGCAGCAAC CGCGATGTCA AAGCTCGAAC CGCACAAAGA GAGGGTCGCA
CGCTGGTATG CACAGGGTAT CCAGGGTTCT ACCATCCATA ACGCCTTGCG CCGCGATCAC
GGCTTCACCG GAGCGTATTC CTGTGTGCGC CGCTACCTCA AGACCCTCAA GAACAAGGAA
CCAAAAACGA CGGTTCGGCT CATCTTTAAA CCCGGGGAAT CCGCCCAGGT GGACTTCGGT
AAAGGACCTG ATTTTAACGA TCCCCATACC GGCAGCCCCG TTAAAAGCTG GATCTTCGTT
ATGACCCTGG CCTGGAGTCG GCACATGTAT GCTGAGATTG TGCCCGATCA AACTATCGAA
ACCTGGCTGG GCTGCCACCG GCGGGCCTTC GAGTTTTTCA ACGGCGTTCC AACCCAGGTA
CGCATCGACA ACCTCAAATC CGCCATCACC AGTGCCAGCT ACTATGAGCC GAAAGTACAG
CGTTCGTATG AGGATCTGGC GCTTGGCTAC GGCTTCAAGA TCGATCCCTG TCCCGTCCAG
GACCCACAAA AAAAGGGCCG GGTGGAGTCA GGGGTCAAAT ACGTCAAAAA TACCTTTGTC
CCCTTGCGCA GGCATCGGAG CATGGCGGAA AGCAACCGTC AGCTCTTGGT ATGGATCATG
GATGTGGCTG GCAATCGCAT CCACGGCACC ACTCATGAAA AGCCCCTGGA ACGGTTTGAG
CACACCGAGC GTTTTGTGTT GCAGCCCTTG CCCGCTATCG CGCCAGAGCT GGCGGTGTGG
CAGCAATGCA AGCTCCACGG AGACTGTCAC ATCTGCCTAA AAAAGTGTTT TTATTCAGCG
CCCTACATCT ATGCCAATCA AACTCTCTGG GTCAAAACCC TGGAGAAGAC CGTCGCCATC
TACAAAGACC ACCAGTTGGT GGCGGCGCAC CCCCGACTGT TTAAGCCAGG TCAGCAATCC
ACCAACAAGG ACCATTATCC GCCAGAGGCC CAGGCCTATC TAATGCGCGA TCCCCAGTGG
TGCGTGGCCC AAGCAGAGAA GATCGGCCCG TCCTGTCGGG CGGTGATTGA CGCGCTCTTC
GCCGACAGGG TCCTGCACAA TCTGCGTGCA GCCCAGGGGC TCATAAGCCT CAAGAAGGCG
TATGGGGCCA AATCCCTGGA ACTGGCCTGC AAACGTGCCG TAGCCTATCT GAGCCCTACA
TACCGCACTG TAAAGAGCAT TCTTAAACAA GGTCTGGAGC AGGAGCCCAT TGAAACCCAA
ACCCAGTTGC CGCTGGATGA GGTGTATACC GGTAAAGGCA AGCATACCCG ACCCCCAACT
GATATGTTCC AATAA
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| Protein sequence | MYQYQHVLHR MRLGDSDRQI QKAGLMGRRK AATVRQKARE QGWLDPACPI PQEADLQATF
GSQSAATAMS KLEPHKERVA RWYAQGIQGS TIHNALRRDH GFTGAYSCVR RYLKTLKNKE
PKTTVRLIFK PGESAQVDFG KGPDFNDPHT GSPVKSWIFV MTLAWSRHMY AEIVPDQTIE
TWLGCHRRAF EFFNGVPTQV RIDNLKSAIT SASYYEPKVQ RSYEDLALGY GFKIDPCPVQ
DPQKKGRVES GVKYVKNTFV PLRRHRSMAE SNRQLLVWIM DVAGNRIHGT THEKPLERFE
HTERFVLQPL PAIAPELAVW QQCKLHGDCH ICLKKCFYSA PYIYANQTLW VKTLEKTVAI
YKDHQLVAAH PRLFKPGQQS TNKDHYPPEA QAYLMRDPQW CVAQAEKIGP SCRAVIDALF
ADRVLHNLRA AQGLISLKKA YGAKSLELAC KRAVAYLSPT YRTVKSILKQ GLEQEPIETQ
TQLPLDEVYT GKGKHTRPPT DMFQ
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