Gene Dret_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0574 
Symbol 
ID8418386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp698068 
End bp698598 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content56% 
IMG OID645037142 
Producthypothetical protein 
Protein accessionYP_003197449 
Protein GI258404707 
COG category[S] Function unknown 
COG ID[COG3334] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTAC GAGGCGAGCG ATTTGGCATG GTGGCTATAG CCGTGATCGT TGCGCTTACA 
ATCGTGGCGG TCTCTTCAGG TTTTGCCCAA GAAGGTGCAG AGGGGCTGCC TCAGGAGCCG
GAGACTGTGG AGCAGCGCCG AATCATTGCT TTGCTCCAGC AGCAGCGTGA GGAGCTTTCC
GAGCGCAAGG TTCGGCTGGA TGAGTGGGAA AATGAGCTAA AGATTCTGCA AAACGAGGTC
GAAGAGAAGC TTGCCCGGAT AAAGAAGGCC CGTGTCGCCC TGGAGGGGCT CCTGAACCAG
AAAGAGCGCA TTGAAGGCCA ACGGGTCGCT GATTTAAGCA GTATTTATCA GCGCATGGAC
CCAGGCCGGG CAGCGGCTGC CTTGGATACG ATGGAGCAGG ATCTTGCCAT CGGCATTTTG
TCCCAAATGC GAAGCAAAGG CGCCGGAGAA ATACTCAATG AAATGTCGAA AGAGAAGGCC
GCGGAGCTAA GCCGCGCATT TACCCGACTC GACACTGCCA GCCCGCCGTA A
 
Protein sequence
MILRGERFGM VAIAVIVALT IVAVSSGFAQ EGAEGLPQEP ETVEQRRIIA LLQQQREELS 
ERKVRLDEWE NELKILQNEV EEKLARIKKA RVALEGLLNQ KERIEGQRVA DLSSIYQRMD
PGRAAAALDT MEQDLAIGIL SQMRSKGAGE ILNEMSKEKA AELSRAFTRL DTASPP