Gene Dret_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0504 
SymbolengA 
ID8418311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp612092 
End bp613417 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content57% 
IMG OID645037067 
ProductGTP-binding protein EngA 
Protein accessionYP_003197379 
Protein GI258404637 
COG category[R] General function prediction only 
COG ID[COG1160] Predicted GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03594] ribosome-associated GTPase EngA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCAA CCGTCGCACT GATCGGACGC CGCAATGTGG GCAAATCCAC ATTGTTCAAC 
CGCCTTATCC GCAAGCAAAA GGCTCTGACC CACGACCGTC CCGGGGTGAC CCGGGACCGT
TTGTATGCCG AAGTGCCCCA CGGTGAGCCG CCCTTTGCCC TGGTGGATAC CGGCGGGCTG
GTTTTGGACG AGAGCGACGG GGTAGAAGCC GACGTTTTCG AACAAGCCCG GGAGGCCATG
GAAGGGGCGC AGCTTATTTT GTTTGTGGTC GATGGGCGCC AGGGGGTGTC CACCATCGAC
GAACAACTGG CCGCTTTTTT GCGCCAGACA GACAAACCGG TCCGTCTGGT GATCAATAAA
GTCGACGGGG CTGAACTCGA AGACACCCTG AGTGCGGAAT TCTATGCCCT GGGATTTCCC
CTGAGTGCGG TTTCCGCAGC CCATGGCTAC GGGACGCTGA CCCTGCAGGA GGAGATCGAG
GAGACTCTCC AGGGGCTTGG GGCCGTGCCG GTGGAGGAGG GGGAACAGGA GGATGATATC
ACCTTGCGCT TGGCCTTGCT GGGGCGGCCC AATGTCGGCA AATCCTCACT GATCAACGCG
TTAGTGGGGG AAAAACGGCT CGTGGTCAGC CCGGAGGCTG GTACGACTAC CGATATCGTT
GACGTCCTCT TTGAAAAAAA GGGCAAACGC TATATTTTTC TCGATTCCGC CGGGGTCAGG
CGCCGCTCCA AAATCGACGA CAGTCTGGAG CGCTTCAGTG TCCTGCGGGC CCTGCGCAAC
AGCAAGCGGG CTCAGGTTAC GGTCCTGTGC CTGGACGCCC TGCAGGGGGT CGTGGGGCAG
GATAAAAAAC TCCTTTCGTT TCTGGACCGG GAAAAGATTC CCTTCATTGT TGCGGTGAAC
AAGGTTGATC TGGTGCCGAG TGATCGCCTG GGGCAACTCA AGAAATATTT TGAAAACGAA
CTGCGGTTTC TCTCCCATGT GCCTCGCATT TATACCTCGG CGGTGAGCAA GGCTGGGCTC
GGCGGATTGT TGCCGCTGAC GGAAAAGCTG TGGAGCGAAT GCACGACGCG GATCGGGACT
GGTCAGCTCA ACCGCGGTCT GGAAGACATG ATCGGCCGGC ATCAGCCCCC CGTGGTCAAG
CACCGGCGGG CGAAATTTTA TTACCTGACC CAGACCGGGA CCACACCGCC GACGTTTGTC
TTTTTTGTGA ACGACAAAAA TCTGGTCAAG CCGTCTTACG CGCGGTATCT CGAAAAACAA
TTGCGAAAGC GATTTCAATT ACGTATGACC CCTATTCAAT TATATTTTCG TACCAGCCGC
GGATAA
 
Protein sequence
MLPTVALIGR RNVGKSTLFN RLIRKQKALT HDRPGVTRDR LYAEVPHGEP PFALVDTGGL 
VLDESDGVEA DVFEQAREAM EGAQLILFVV DGRQGVSTID EQLAAFLRQT DKPVRLVINK
VDGAELEDTL SAEFYALGFP LSAVSAAHGY GTLTLQEEIE ETLQGLGAVP VEEGEQEDDI
TLRLALLGRP NVGKSSLINA LVGEKRLVVS PEAGTTTDIV DVLFEKKGKR YIFLDSAGVR
RRSKIDDSLE RFSVLRALRN SKRAQVTVLC LDALQGVVGQ DKKLLSFLDR EKIPFIVAVN
KVDLVPSDRL GQLKKYFENE LRFLSHVPRI YTSAVSKAGL GGLLPLTEKL WSECTTRIGT
GQLNRGLEDM IGRHQPPVVK HRRAKFYYLT QTGTTPPTFV FFVNDKNLVK PSYARYLEKQ
LRKRFQLRMT PIQLYFRTSR G