Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0495 |
Symbol | |
ID | 8418301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 600104 |
End bp | 602782 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645037057 |
Product | translation initiation factor IF-2 |
Protein accession | YP_003197370 |
Protein GI | 258404628 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.221081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.759489 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTA AAATGCGCGT GAGAGAATTG TCCAACGAAT TGGGCCTCTC CAATAAGGAA CTTCTCCACC TGCTCAGAGA ACTGGGCATT CAGGTCAAAA GCCATATGAG CGGGCTTTCA GATGACGAGG TGGATCAGGT GCGCCAACGT TTCCACGCAG GCAGCCAGAG CCAGGATTCG GTGCAAAAAC GGACTACCCG CTCCGGGGTC ATCGTGCGCC GCAGACGGCG CGCTGCGAAA AGCGAATCCG AGCCCGAGCC GCAACCGGCC GAAGAGCCGG AGGCCGAACC GGAAGCCGCG GCAGAGGCCG CGGCAGCGGA ACCCCAGCCC GAACCCGCTC CCACCGCCCG GATTGTCGAA CCGCCGCATG CGGACGAAGA GCCCGAGGAA GGTGAACCGG AAGCTGAAGA ACCGGAAGCT GAGGAGCCCC AACACCCGGA GGAGACGACT CAGGCGGAAC CTGCACAGGA CACTGGCGTA GCCCAGGAGC CTCAGGAGAC CGAAGAGACC ATTCAGGAGC AGCCCGCCGA GGACTCAGAA GAGCCCTCTG AGACGGAAGC CGGGAAAAAG AAGAAGAAAA AGCGGAAAAA GAAACCGGAA TCGCCGGCAG TCAAGGTCAT CTCCAAACCC GAGGTCACCG CTGAAGAGCC GGCACCAAGC CCTGCTCCTG CCGAGGCAGC CGATACCGAG GCCGCTTCAA AGAAGAAAAA GAAAAAAGAC AAGCGGGTAG TCGATTTCAG CAGCACGCCT GCCGAAGCCG AACCGCAAGA CAAACGCAAG GCCTCGACCC AGTGGAAGAA AAAGAAAAGC GCCGGGGTCA AGGACAAAAC CGGAGGCAAG GAACGTCGCC CGGGGCGCAA GCGTCAGCAG CAAGGCGGCA AGGCAGAACC GGTTCGCCCC ACGACCCAGC CGACCAAGGC CTCAAAGCGT AAAATCAAGA TCGACGAAGC CATCCGTTTG GGCGACTTGG CCAGGCAGCT GGGCGTCAAG GTGCAGGAAC TGATCAAGTC CCTGATGCAA CTCGGCATCA TGGCCACTAT CAACCAATCC TTGGATATCG AGACCGCCAC AGTCCTGGCT GAAGAATTCG GCTACGAAGT CGAAAAGGTC GGTTTTTCGG AAGATGAATT CATCCTGCCC AAGGAAGAAG ACAACCCCGA AGCTCTTGAA CCACGCTGGC CGGTGGTCAC CATCATGGGC CACGTCGACC ACGGTAAAAC CTCGCTTTTG GACGCCATCC GAGAGTCCAA GATCACGACA AAAGAGGCCG GCGGCATCAC CCAGCATATC GGGGCCTATT ATGTCGGCAC GGATCGCGGC GAACTTGTCT TCCTTGATAC GCCCGGCCAC GAAGCTTTCA CGGCCATGCG GGCCCGCGGA GCGCAGGTCA CGGATATCGT CATCCTCGTG GTCGCCGCTG ACGACGGGGT CATGGACCAG ACCCGTGAGG CCATCAACCA CTCCAAGGCC GCTGGCGTTC CGCTTATTGT AGCGGTCAAC AAGATGGACA AAGAAAACGC CGACCCCGAG CGCGTCAAGC GCGAACTCGC CGAGTTCGAT CTGGTCCCTG AGGAATGGGG CGGCGACACC ATTTACGCCT ATGTCTCGGC CAAGTCCCAC TCCGGTCTCG ACGATTTGCT CGAGATGGTT CTCCTGCAGG CCGAGGTCCA GGAACTCAAG GCCAACCCCG CCAAACGGGC CCGGGGCCAC ATTGTCGAGG CCAAACTCGA TAAGGGGCGC GGCGCGGTCG GGACTGTCCT GGTCCAGGAA GGGACCCTGC ATCACGGCGA CGCCTTTGTC TGCGGTCTTT ACCACGGGAA AGTCCGGGCC TTGTTCAACG ACCGGGGCAA GAACATCAAA TCAGCCGGCC CCTCCATGCC GGTTGAGGTC CAGGGATTTG ACGGCGTCCC CGAGGCTGGC GACGAATTCG TGGCCGTGCA GGACGACAAG GTTGCCCGGC GCATTGCCGA AGAACGGCAA ACGAAGCAGC GGGAAAAGGA CTTGGCCAAG GAAACCAAGG TGACTTTGGA AAGCTTCATG GCCGCCAAGG CCGACGAAGA GGTCAAATCC CTGAACCTGG TCATCAAAGC CGACGTCCAG GGTTCCTTGG AGGCCTGCAT CGAGGCGGTT CGCAAATTGA GCACCGACGA GGTCAAAGTG GAAATCATCC ACGGCGGTAC CGGGTCCATT TCCGAATCGG ACATCATGCT CGCCTCGGCC TCCTCCGCCG TCCTGATCGG CTTCAACGTC CGTCCCACGG CACGGATCAA GGATATCGCC GAGCAGGAAA AAGTGGACAT CCGCTTCTAT GACGTCATCT ATCAGATGGT CAACGAAGTA AAAGACGCCA TGGCCGGCAT GCTGGCCCCG GTGGTCAAGG AGGTCTACCT TGGTCAGGCC GAAGTCCGGG ACACCTTCAG TGTGCCCAAG GTGGGCACTG TGGCCGGTTG CATGGTCGTG GACGGCAAAC TCCAACGCAA CGCCCACACA CGGCTGTTGC GCGATGGAGT GGTCATCTAC ACCGGCAAAA TCGATTCTTT GAAACGCTTC AAAGACGACG CCAAGGAAGT CCAGAAAGGC TTCGAATGCG GTGTCGGCCT GGAGAATTTC AACGACATCA AATCCGGCGA CATCATCGAG GCTTTCGAAG AGGTCCAGGA AAAAGCGACC CTGGATTAG
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Protein sequence | MTTKMRVREL SNELGLSNKE LLHLLRELGI QVKSHMSGLS DDEVDQVRQR FHAGSQSQDS VQKRTTRSGV IVRRRRRAAK SESEPEPQPA EEPEAEPEAA AEAAAAEPQP EPAPTARIVE PPHADEEPEE GEPEAEEPEA EEPQHPEETT QAEPAQDTGV AQEPQETEET IQEQPAEDSE EPSETEAGKK KKKKRKKKPE SPAVKVISKP EVTAEEPAPS PAPAEAADTE AASKKKKKKD KRVVDFSSTP AEAEPQDKRK ASTQWKKKKS AGVKDKTGGK ERRPGRKRQQ QGGKAEPVRP TTQPTKASKR KIKIDEAIRL GDLARQLGVK VQELIKSLMQ LGIMATINQS LDIETATVLA EEFGYEVEKV GFSEDEFILP KEEDNPEALE PRWPVVTIMG HVDHGKTSLL DAIRESKITT KEAGGITQHI GAYYVGTDRG ELVFLDTPGH EAFTAMRARG AQVTDIVILV VAADDGVMDQ TREAINHSKA AGVPLIVAVN KMDKENADPE RVKRELAEFD LVPEEWGGDT IYAYVSAKSH SGLDDLLEMV LLQAEVQELK ANPAKRARGH IVEAKLDKGR GAVGTVLVQE GTLHHGDAFV CGLYHGKVRA LFNDRGKNIK SAGPSMPVEV QGFDGVPEAG DEFVAVQDDK VARRIAEERQ TKQREKDLAK ETKVTLESFM AAKADEEVKS LNLVIKADVQ GSLEACIEAV RKLSTDEVKV EIIHGGTGSI SESDIMLASA SSAVLIGFNV RPTARIKDIA EQEKVDIRFY DVIYQMVNEV KDAMAGMLAP VVKEVYLGQA EVRDTFSVPK VGTVAGCMVV DGKLQRNAHT RLLRDGVVIY TGKIDSLKRF KDDAKEVQKG FECGVGLENF NDIKSGDIIE AFEEVQEKAT LD
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